Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq165 95.1 1e-14 seq54 87.8 2e-12 >seq165 Length=362420 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | ||| |||||||| |||||||| || || | ||||| | | || || Sbjct 207218 CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTC 207159 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 ||||||||||| ||| | || || | ||| |||||| || | ||| |||||||| Sbjct 207158 GAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTG 207100 Query 21086 GATCTTTTGTTTCACCTGGC--CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| ||| ||| | | || || ||| ||| | ||| |||||| Sbjct 207099 GATCTTGCCCTTCAC--GGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTC 207043 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || |||||||| || ||||| Sbjct 207042 TTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 >seq54 Length=1324731 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| |||||||| ||||| | Sbjct 967824 CCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 967765 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| || | || || | ||||||||| || Sbjct 967764 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 967705 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC--CGACAGTATCACCGGGCTCCG 21126 | ||| |||||||| ||||||| ||||| ||| ||| | ||| | ||| Sbjct 967704 ATGCCCTCCTTGTCCTGGATCTTTCCCTTCAC--GGCCTCGATGGAGTCAGAAGACTCGA 967647 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| ||||| || || ||||| || || ||||| Sbjct 967646 CCTCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257568627972