Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq165 140 3e-28 seq54 125 6e-24 seq257 104 2e-17 seq124 104 2e-17 >seq165 Length=362420 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | |||||||| || || ||||| |||||| | ||| || ||||| Sbjct 206992 CACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCCTC 206933 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||| Sbjct 206932 AAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTG 206873 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| ||| ||||| |||| |||| | | |||||| || | ||| | || || Sbjct 206872 AATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTCTT 206813 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || || |||||||| Sbjct 206812 GCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 111 bits (122), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 118528 ACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 |||||| ||||| |||||||| || ||||||||||||||| | || || ||| | Sbjct 207219 ACACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTT 207160 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 |||||||||| || || |||| || ||||| || || ||||| ||| |||||||||| Sbjct 207159 CGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATG-CCTCCTTGTCCT 207101 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || |||| |||| | | ||| || || | ||| | || | Sbjct 207100 GGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCT 207042 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||||| ||||| || ||||| ||||||||| || Sbjct 207041 TGCCGGTGAGAGTCTTGACAAAGATCTGCATGCCT 207007 Score = 104 bits (114), Expect = 2e-17 Identities = 152/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | |||||||| || || || || || ||| | || || ||| || Sbjct 206710 ACCAAGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTC 206651 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| |||||||| || |||||||| ||||||||||| ||| Sbjct 206650 AAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTG 206591 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || ||| || | | || | ||||||||| | ||| | || || Sbjct 206590 AATCTTGCCCTTCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTT 206531 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||||| ||||| || ||||| ||||||||| || Sbjct 206530 GCCGGTGAGAGTCTTGACAAAGATCTGCATGCCT 206497 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || ||||||||||| | ||||| |||||| ||||| || || Sbjct 207432 GTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGCTGCTTGCCC 207373 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||||| ||||||||||| || ||||||||||| || || ||| Sbjct 207372 GCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGCCTTTG 207313 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || |||| |||| | ||||||||||| ||| | || || || || || || Sbjct 207312 ACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGTAAGCGTC 207253 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || || || || |||||| || Sbjct 207252 TTCACGAATATTTGCATGCCT 207232 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||||||| | |||||| |||||| || || ||||| Sbjct 206469 GTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGCCCATCCTCAAGTTGCTTTCCG 206410 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||| ||||||| |||||||| ||||| || |||| Sbjct 206409 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGC 206376 >seq54 Length=1324731 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || | ||| || |||||||||||| || ||| Sbjct 967794 GTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCGAGCTGCTTGCCA 967735 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||||||||||||||| |||||||| |||||||||||||| || ||| || Sbjct 967734 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTCCCTTC 967675 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || |||| || ||| | ||||||||||| || | || || ||||||| || Sbjct 967674 ACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTC 967615 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 967614 TTGACGAAGATCTGCAT 967598 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || ||||||||||| | |||||| |||||||||||| || ||| Sbjct 968022 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCA 967963 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||||| || ||||| |||||||||||||| ||| || || Sbjct 967962 GCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTACCCTTG 967903 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || |||| || ||| | ||||||||| | || | ||| |||||||||| || Sbjct 967902 ACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAGGTC 967843 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 967842 TTGACGAAGATCTGCAT 967826 Score = 118 bits (130), Expect = 9e-22 Identities = 153/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || ||||| || || |||||||| ||| || || || |||||| Sbjct 967523 ACCAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTC 967464 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||||||||||||||| |||||||| ||||||||||| || Sbjct 967463 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTG 967404 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || |||| | ||| | ||||||||| | || | ||| || Sbjct 967403 GATCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTT 967344 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| ||| || || || |||||||| Sbjct 967343 GCCGGTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || || || || ||||| ||| | || || ||||||||||| || || Sbjct 967282 GTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCG 967223 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || ||||||||||| || ||||| || ||||||||||| ||| || ||| Sbjct 967222 GCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGCCTTTG 967163 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || |||| || ||| | | ||| ||||||| || | || || || |||| || Sbjct 967162 ACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTC 967103 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 967102 TTGACAAAGATCTGCAT 967086 >seq257 Length=1005854 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| || || |||||||| ||||||| ||||| |||||| Sbjct 387507 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCCTC 387448 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||| || || ||| |||||||||||||||| || ||||| || Sbjct 387447 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGAT 387403 >seq124 Length=638099 Score = 104 bits (114), Expect = 2e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || ||||||||||| ||||||| || || |||||| Sbjct 263060 CACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCATCCTC 263119 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| |||||||| |||||||||| || || || ||||| |||| Sbjct 263120 GAGCTGCTTTCCAGCAAAGATGAGACGTTGTTGGTCCGGAGGAATGC 263166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828723923364