Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq165 116 2e-21 seq54 111 1e-19 >seq165 Length=362420 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | |||| || ||||| ||||| || ||||| || ||| |||| Sbjct 206994 AGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCC 206935 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| ||||| ||||| ||||| ||||| || ||| || | || ||||||||| Sbjct 206934 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCT 206875 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | | || |||| || ||||| || | |||||||| Sbjct 206874 TGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTC 206815 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||||||||| Sbjct 206814 TTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || || |||||||| || ||| | || || | ||||||||| ||||| Sbjct 206691 TCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCGGCGAAG 206632 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| |||||| || | || |||||| || ||||| ||| | | Sbjct 206631 ATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTCACCGCC 206572 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || ||| | || ||||| || | ||||| || |||||||||||||| || ||| Sbjct 206571 TCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTCTTGACA 206512 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 206511 AAGATCTGCAT 206501 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 34180 CACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTC 34239 ||||||||| | |||| || ||||| |||||||| ||||| || ||| | || || Sbjct 207218 CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTC 207159 Query 34240 CAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGC 34299 | ||| ||||| || || || || ||||| ||||| || | || ||||||||| Sbjct 207158 GAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGC-CTCCTTGTCCTG 207100 Query 34300 TATCTTTTGCTTTAGATCGGCTATCGAATCGGTCG----ATTCGACGTCCACCGTGATGG 34355 ||||| ||| | |||| |||| | |||| | || || || | || |||| Sbjct 207099 GATCTTGCCCTTCA---CGGCC-TCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGG 207045 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||||||||||||| || |||||||||||||| Sbjct 207044 TCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 >seq54 Length=1324731 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||||| ||| | || || | ||||||||| ||||| Sbjct 967504 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAAG 967445 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| || | || |||||| || ||||| ||| | | Sbjct 967444 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTGACGGCC 967385 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || || || | || ||||| || | |||||| || |||||||| | ||| || || Sbjct 967384 TCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTCTTGACG 967325 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 967324 AAGATCTGCAT 967314 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || |||| | || || | ||||||||| ||||| Sbjct 967788 TCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 967729 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| || | || ||||||||| |||||| ||| | | Sbjct 967728 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCC 967669 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || || || | || ||||| || | |||||| || || ||||| | || || || Sbjct 967668 TCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACG 967609 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 967608 AAGATCTGCAT 967598 Score = 102 bits (112), Expect = 5e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | |||| ||| ||||| || ||||||||||| || || |||| Sbjct 967297 AGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCC 967238 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| |||||||| || ||||||||||| || | | ||||||||| Sbjct 967237 TCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTC- 967179 Query 34298 GCTATCTTTTGCTTTAGATCGGCT--ATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 || | |||| || || | || || || || | || || || || | ||||||| Sbjct 967178 -CTGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGG 967120 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || || | || || |||||||||||||| Sbjct 967119 TCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| |||||||| || || || || | || Sbjct 968037 AGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCC 967978 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || | ||||||||||| || | || ||||||||| Sbjct 967977 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 967918 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | || || |||| || ||||| || | |||||| || Sbjct 967917 TGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTC 967858 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| | || || || ||||||||||| Sbjct 967857 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070751831520