Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq165 122 7e-23 seq54 109 4e-19 >seq165 Length=362420 Score = 122 bits (134), Expect = 7e-23 Identities = 157/213 (74%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCG 45184 |||| || || ||||| |||||||| |||||||| || | | | || || | || Sbjct 207446 TACCGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTG-CGTCCATCC 207388 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| || || || ||||| ||||| |||||||| |||||||| | ||||||||||||| Sbjct 207387 TCCAGCTGCTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCC 207328 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || || || ||| | | ||||| | ||| ||||| | |||||| ||| Sbjct 207327 TGGATCTTGCCTTTGACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTC 207268 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || |||||||| || ||||||||| Sbjct 207267 TTTCCCGTAAGCGTCTTCACGAATATTTGCATG 207235 Score = 113 bits (124), Expect = 4e-20 Identities = 153/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| || || || ||||||||| || || |||||| || || | || | Sbjct 206711 TACCAAGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTT 206652 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | || || || |||||||| || | ||||||||||||||||| | |||||||| || Sbjct 206651 CAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTT 206592 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 ||| || ||| |||||| | | || || | ||| ||||| | ||| || |||| Sbjct 206591 GAATCTTGCCCTTCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCT 206532 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||| || |||||||| |||||||| |||||| Sbjct 206531 TGCCGGTGAGAGTCTTGACAAAGATCTGCATG 206500 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||| || ||| || ||| |||| || || ||||| || ||||| Sbjct 206974 CTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCCTCAAGCTGTTTGCCAGCGAA 206915 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | |||||||| |||||||| | ||||||||||| ||| ||| |||||| || Sbjct 206914 GATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTGAATCTTTCCCTTAACAGC 206855 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| ||| || || | ||| || |||||||| || || ||||| || Sbjct 206854 CTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTCTTGCCGGTGAGCGTCTTAAC 206795 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 206794 GAAGATCTGCAT 206783 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || |||||||||||||||||| ||| || || | || || Sbjct 207217 ACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCG 207158 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| ||||| || |||| ||||||||||| ||||| | ||||||||||| Sbjct 207157 AGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGA-TGCCTCCTTGTCCTGG 207099 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || ||| | | ||||| ||| || || | ||| || |||||| Sbjct 207098 ATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTG 207040 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || |||||||| |||||||| |||||| Sbjct 207039 CCGGTGAGAGTCTTGACAAAGATCTGCATG 207010 >seq54 Length=1324731 Score = 109 bits (120), Expect = 4e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 |||||||| || || || ||||||||| |||||||||||| || ||| | || Sbjct 967525 ATACCAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCC 967466 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| || | ||||| ||||||||||| | |||||||| ||| Sbjct 967465 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCC 967406 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || ||| | | ||| | ||| ||||| | || |||||| Sbjct 967405 TGGATCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTC 967346 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| |||| |||||| || ||||| ||||| Sbjct 967345 TTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||| || || |||| | || || || || || || ||||| Sbjct 968017 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAA 967958 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||| ||||| ||||| ||||| | |||||||||||| ||| || ||| || || Sbjct 967957 GATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTACCCTTGACGGC 967898 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | ||| | ||| ||||| | || ||||||||||| |||| ||||| || Sbjct 967897 CTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAGGTCTTGAC 967838 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 967837 GAAGATCTGCAT 967826 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| || ||||||||| || ||| |||| || || || || |||||||| Sbjct 967276 TCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCGAAA 967217 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | ||||| ||||| ||||| | ||||||||||||| ||| || || || ||| Sbjct 967216 ATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGCCTTTGACGGCC 967157 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||| ||| ||||| | || || ||||| || |||| ||||| ||| Sbjct 967156 TCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACA 967097 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 967096 AAGATCTGCAT 967086 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||||||||||||||| || || | || || | Sbjct 967805 CAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCGA 967746 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || ||||| || | ||||| ||||||||||| | |||||||||||| | Sbjct 967745 GCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGA 967686 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | ||| ||| || ||| | | | ||| | ||| ||||| | || || ||||| | Sbjct 967685 TCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTTC 967626 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | |||| ||||| || ||||| ||||| Sbjct 967625 CGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 87.8 bits (96), Expect = 1e-12 Identities = 82/103 (80%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| || || |||||||||||||| ||||||||||| ||| |||| |||| | Sbjct 967006 TACCAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCGTCCT 966947 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 | || || ||||| ||||| ||||| ||||| ||||| || || Sbjct 966946 CAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGGGG 966904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073673651657