Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 >seq1 Length=1832336 Score = 113 bits (124), Expect = 4e-20 Identities = 239/355 (67%), Gaps = 4/355 (1%) Strand=Plus/Minus Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254 |||| | ||||||||| || || | |||||| |||| ||| || |||||||| || Sbjct 898318 AAAAGCAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAG 898259 Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314 || || || |||||||| | || || || || ||||||||||| | || || || || Sbjct 898258 AAAGTCAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCA 898199 Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374 || |||||||| || || || | |||||||| | | | | ||||| || | || Sbjct 898198 GAGAAGAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTT 898139 Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 |||| |||||||| |||||| || | || | || ||| | | || ||| Sbjct 898138 TTGTCAGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCA 898079 Query 14435 ATAGCATTAAATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 14492 || ||| ||| |||| ||| || | | || |||| || || || ||||| || | Sbjct 898078 ATCGCAGCAAACAAATACTCCCGCTCCCGTGGGTCCTTG--ATATAGGTGTCAATGAGCA 898021 Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547 | |||| | || ||||| | ||| ||||| ||||| || || || ||||| Sbjct 898020 ACGAATACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACA 897966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482343688705560