Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq296 87.8 4e-12 seq215 84.2 4e-11 >seq296 Length=2232338 Score = 87.8 bits (96), Expect = 4e-12 Identities = 161/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 |||||| | | ||||| || |||| |||||||||| ||||||| ||||| | Sbjct 1744441 ATCTGGGATGGAAATGGCTCTAGGGAGTTTTTGGACAAGCGAGGGTTGAGTCATAGACGA 1744382 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 |||||||| |||||||| || || || || || ||| | ||||||||||| | ||||| Sbjct 1744381 GAGGGAGACTTGGGACCTGTGTATGGGTTTCAGTGGAGACATTTTGGTGCGAAGTATGAG 1744322 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTG-GCCAAT--ATACTAAAG 35509 ||| |||||||| ||| |||| | ||||| || ||| |||| |||| Sbjct 1744321 GATTGTGACAAGGATTATACGGGAGAGGGCGTGGATCAGCTGAAGGAATGCATACGAAAG 1744262 Query 35510 ACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562 | | | |||| |||| || ||||||| || ||| || |||||||| Sbjct 1744261 A---TCAAAGAAGATCCCACAGACCGAAGGATAATCTTGAGTGCTTGGAATCC 1744212 >seq215 Length=105717 Score = 84.2 bits (92), Expect = 4e-11 Identities = 160/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 |||||| | | ||||| || |||| |||||||||| ||||||| ||||| | Sbjct 68815 ATCTGGGATGGAAATGGCTCTAGGGAGTTTTTGGACAAGCGAGGGTTGAGTCATAGACGA 68874 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 |||||||| |||||||| || || || || || ||| | ||||||||||| | ||||| Sbjct 68875 GAGGGAGACTTGGGACCTGTGTATGGGTTTCAGTGGAGACATTTTGGTGCGAAGTATGAG 68934 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTG-GCCAAT--ATACTAAAG 35509 ||| |||||||| ||| |||| | ||||| || ||| |||| |||| Sbjct 68935 GATTGTGACAAGGATTATACGGGAGAGGGCGTGGATCAGCTGAAGGAATGCATACGAAAG 68994 Query 35510 ACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562 | | | |||| |||| || ||||||| || ||| || ||||| || Sbjct 68995 A---TCAAAGAAGATCCCACAGACCGAAGGATAATCTTGAGTGCTTGGAACCC 69044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989579980742735