Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 136 5e-27 >seq1 Length=1832336 Score = 136 bits (150), Expect = 5e-27 Identities = 293/434 (68%), Gaps = 7/434 (2%) Strand=Plus/Minus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 || ||| || || ||| ||| | |||||||||| ||| || | |||||| || || || Sbjct 898313 CAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGT 898254 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 | || ||||| ||||||||||| || | ||||||||| |||||||| || ||||| || Sbjct 898253 CAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAA 898194 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC--ACTGTC 36330 ||| || ||||| || ||||||| || | || ||| | ||| | || | |||| Sbjct 898193 GAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTTTTGTC 898134 Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 36390 | ||||||| ||||||| || |||||| | || | ||| || | ||||| || || Sbjct 898133 AGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGC 898074 Query 36391 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTA 36448 | ||| | ||| | || || || | ||| || ||||| | || || | Sbjct 898073 AGCAAACAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGA--A 898016 Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 ||| | || || || | ||| || || || || || ||||||||||| | |||||| Sbjct 898015 TACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCCTCG 897956 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 | | || || || | | || || || | | ||||| ||||| || ||||| | Sbjct 897955 GCGACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTCGGAG 897896 Query 36569 GCTGCAAAAAACGC 36582 || || || || || Sbjct 897895 GCGGCGAAGAAGGC 897882 Score = 107 bits (118), Expect = 3e-18 Identities = 382/589 (65%), Gaps = 10/589 (2%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| | |||||||| | || || | |||||||| || ||||| Sbjct 895959 CAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGA 896018 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || ||||| ||||||||||| || ||||| || || || || || || || || ||||| Sbjct 896019 CCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAG 896078 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCAC-TGTCATGT 36334 || || || || || || ||||| | || | ||| | | || | | |||| ||| Sbjct 896079 ATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTC-TGT 896137 Query 36335 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||| | ||||| ||||||||||| || | || || || ||||| || || | Sbjct 896138 GATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTC 896197 Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 36453 ||||| || | | || || || | || || || || | || || | Sbjct 896198 GAAGAGGTATTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGT 896257 Query 36454 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 36513 || || || ||||| || || || || || |||||||| || | ||||||| Sbjct 896258 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGC 896317 Query 36514 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 36573 ||| || || | | ||||| || | | || || || || || ||||| ||| || Sbjct 896318 CTGCACCTCGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGC 896377 Query 36574 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTAGTTTATT---CC 36629 || || || | || || || || | ||||| | || | || || || || Sbjct 896378 GAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGT-TGAGCTTCTTCTCCC 896436 Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 | || | || || || | |||| || || ||||||| || || ||||| |||| Sbjct 896437 AGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCT 896496 Query 36690 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | || ||||| | |||||| ||||| ||||| || || || | ||| || Sbjct 896497 TCTTGTACATTTGCCAGATCTCATGGTATTGGATAGGGAATAGAACGAA 896545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170191990280