Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 152 7e-32 >seq1 Length=1832336 Score = 152 bits (168), Expect = 7e-32 Identities = 390/588 (66%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||| |||||||| | || || || |||||||| || ||||| Sbjct 895959 CAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGA 896018 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| ||||||||||| || ||||| || || || || || || || || |||||| Sbjct 896019 CCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAG 896078 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGCGC-TGTCATGT 50136 || || || || ||||| ||||| || || | ||| | | || | | |||| ||| Sbjct 896079 ATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTC-TGT 896137 Query 50137 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | ||||| ||||||||||| || | || || || || || ||||| | Sbjct 896138 GATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTC 896197 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||| || | | || || || | || || ||||| | || || | Sbjct 896198 GAAGAGGTATTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGT 896257 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || || ||||| || || ||||| || |||||||| || | ||||||| Sbjct 896258 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGC 896317 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 |||||| || | | ||||| || | | || || || || || ||||| ||| || Sbjct 896318 CTGCACCTCGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGC 896377 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT---CCA 50432 || || || | || || || || || |||||| | || || || ||| Sbjct 896378 GAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCCA 896437 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | || || || | || | || || ||||||| || || ||||| ||||| Sbjct 896438 GTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCTT 896497 Query 50493 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || ||||| | |||||| ||||| |||||||| ||||| | ||| || Sbjct 896498 CTTGTACATTTGCCAGATCTCATGGTATTGGATAGGGAATAGAACGAA 896545 Score = 145 bits (160), Expect = 1e-29 Identities = 295/434 (68%), Gaps = 7/434 (2%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 || ||| || || ||| ||||| |||||||||| ||| || |||||||| || || || Sbjct 898313 CAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGT 898254 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 | || ||||| ||||||||||| || | ||||||||| |||||||| |||||||| || Sbjct 898253 CAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAA 898194 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA--AC-TGGCGCTGTC 50132 ||| || ||||| || | ||||| || || || ||| | ||| | || | |||| Sbjct 898193 GAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTTTTGTC 898134 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 | ||||||| ||||||| || |||||| | || | ||| || | || || || || Sbjct 898133 AGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGC 898074 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTA 50250 | ||| | ||| | || || || | ||| || || || | || || | Sbjct 898073 AGCAAACAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGA--A 898016 Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 ||| | || || || | ||| || || ||||| || ||||||||||| | |||||| Sbjct 898015 TACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCCTCG 897956 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 | | || || || | | || || || | | ||||| ||||| || ||||| | Sbjct 897955 GCGACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTCGGAG 897896 Query 50371 GCTGCAAAAAACGC 50384 || || || || || Sbjct 897895 GCGGCGAAGAAGGC 897882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265953859880