Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 >seq1 Length=1832336 Score = 122 bits (134), Expect = 8e-23 Identities = 241/355 (68%), Gaps = 4/355 (1%) Strand=Plus/Minus Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922 |||| | ||||||||| || || | |||||| |||| ||| || |||||||| || Sbjct 898318 AAAAGCAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAG 898259 Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982 || || || |||||||| | || || || || ||||||||||| | ||||| ||||| Sbjct 898258 AAAGTCAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCA 898199 Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042 || |||||||| || || || | |||||||| | | | | ||||| || | || Sbjct 898198 GAGAAGAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTT 898139 Query 14043 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102 |||| |||||||| |||||| || | || | || ||| | | || ||| Sbjct 898138 TTGTCAGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCA 898079 Query 14103 ATAGCATTAAATAAATATTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 14160 || ||| ||| ||||| ||| || | | || |||| || || || ||||| || | Sbjct 898078 ATCGCAGCAAACAAATACTCCCGCTCCCGTGGGTCCTTG--ATATAGGTGTCAATGAGCA 898021 Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215 | |||| | || ||||| | ||| ||||| ||||| || || || || || Sbjct 898020 ACGAATACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACA 897966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726099077800