Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=1832336 Score = 104 bits (114), Expect = 2e-17 Identities = 237/355 (67%), Gaps = 4/355 (1%) Strand=Plus/Minus Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 |||| | ||||||||| || || | |||||| |||| ||| || |||||||| || Sbjct 898318 AAAAGCAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAG 898259 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 || || || |||||||| | || || || || ||||||||||| | || || || || Sbjct 898258 AAAGTCAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCA 898199 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 || |||||||| || || || | |||||||| | || | | ||||| || | || Sbjct 898198 GAGAAGAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTT 898139 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 |||| |||||||| |||||| || | || | || ||| | | || || Sbjct 898138 TTGTCAGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCA 898079 Query 13891 ATTGCATTGAATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 13948 || ||| || |||| ||| || | | || |||| || || || ||||| || | Sbjct 898078 ATCGCAGCAAACAAATACTCCCGCTCCCGTGGGTCCTTG--ATATAGGTGTCAATGAGCA 898021 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003 | |||| | || ||||| | ||| || || ||||| || || || ||||| Sbjct 898020 ACGAATACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACA 897966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478586903591880