Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 259 7e-64 >seq1 Length=1832336 Score = 259 bits (286), Expect = 7e-64 Identities = 578/856 (68%), Gaps = 29/856 (3%) Strand=Plus/Minus Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069 || ||||| || ||| |||||||||| ||||| |||||||||| ||||| | || ||| Sbjct 896524 TACCATGAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACAGCAGAGGAG 896465 Query 125070 GTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG 125129 | || || |||||||||| | |||| ||||||| | | || | ||||| | Sbjct 896464 ATGGACCTCTCCAAGGACCAGCACGACTGGGAGAAGAAGCTCAACGACAACGAGCGCCAC 896405 Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT- 125188 || || || ||| | | |||||||| || | |||||| || ||||||||||| || || Sbjct 896404 TTCATCTCCCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAGAACCTC 896345 Query 125189 GTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTC 125246 || || |||||||| | ||| || || || |||| | ||||| ||||| ||| Sbjct 896344 GTCGAG-CGATTCTCCAACGAGGTG--CAGGCCGCCGAGGCGCGTTGCTTCTACGGTTTC 896288 Query 125247 CAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATT 125306 || |||||||| |||||| | ||||| || | ||||| || || |||| ||||| Sbjct 896287 CAGATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACCTACATC 896228 Query 125307 CGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATA 125363 || || ||| || || || ||||| |||| ||||| || | || | || Sbjct 896227 AAGGACCCCAAGCAGCGCGAATAC---CTCTTCGACGCCATCGAGACCATCCCCTGCATC 896171 Query 125364 CGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGAC 125423 || ||||| | |||| | || |||||| ||| | || || || | |||||| Sbjct 896170 AAGAAGAAGGCCGACTGGGCCCTGCGCTGGATCACAGACAAGAACTCGTCCTTCGCCGAG 896111 Query 125424 AGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATC 125483 | || || || ||||||||||| ||||| |||||||| || || || || | ||| Sbjct 896110 CGTCTCGTCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATC 896051 Query 125484 TTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCT 125543 || |||||||||||||| || || ||||| || || || | |||||| | || Sbjct 896050 TTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCAGC 895991 Query 125544 CGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCC 125602 || ||||||||| | ||| ||||||||| || || || || || || ||| | Sbjct 895990 CGTGACGAGGGCATGCACACCGACTTTGCCTGCCTCCTCTTCTCCCACCT-CAGGCGCC- 895933 Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || | | || ||| | ||| | | || | ||| ||||| || || Sbjct 895932 ---GTCCTCACCC--CGACG---TCGTCCGCCAGATCATCGTCGAGGCCGTCGCCATCGA 895881 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722 || ||||| || || || | || || ||| | || ||||||||| ||| | || Sbjct 895880 GCAGGAGTTCCTGACGGACGCGCTCCCCGTCTCTCTCATCGGCATGAACGCGAAGTTGAT 895821 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA- 125781 |||| ||||||| ||||| || || || ||||| |||| || | |||| | ||| Sbjct 895820 GTGCCAGTACATCGAGTTCGTCGCGGACCGTCTGCTGTGCG---CGCTTGGTAACGAGAG 895764 Query 125782 --TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 |||||| | | ||| ||||| ||||||||| | || || || |||| ||||| Sbjct 895763 GCACTACAACTCGACGAACCCCTTCGATTTCATGGATATGATCTCGCTCCAGGGCAAGAC 895704 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 895703 CAACTTCTTCGAGAAG 895688 Score = 136 bits (150), Expect = 6e-27 Identities = 376/567 (66%), Gaps = 12/567 (2%) Strand=Plus/Plus Query 125028 ATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGAC 125087 ||||||||| | || |||||||||| ||||| | ||||||| | || || | ||| Sbjct 897762 ATGTACAAACAAGCCGAGGCCTCCTTCTGGACCGCCGAAGAGATAGACCTCGGACACGAC 897821 Query 125088 CTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTT 125146 || ||| ||| | ||| || | || | | || || || || |||||| | | Sbjct 897822 CTAGTCGACTGGAACGAC-CGCCTCACGCACCCCGAACGCACCTTCATCTCGCACGTGCT 897880 Query 125147 GGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTC 125205 |||||||| |||| |||||| || ||||| ||||| || || || || || ||||| Sbjct 897881 CGCCTTCTTCGCCGCCTCCGACGGCATCGTGAACGAAAACCTCGTCGAG-CGGTTCTCCA 897939 Query 125206 AAGAGTTGACCATTC-CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAAC 125264 | || | | | || | |||| | || || ||||| ||||| |||||||| |||||| Sbjct 897940 ACGACGTC-CAAGTCGCCGAGGCGCGCTGTTTCTACGGGTTCCAGATCATGATGGAGAAC 897998 Query 125265 GTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAACGT 125321 |||||||| || | ||| || || ||||||| || || || || | | || Sbjct 897999 GTGCACTCCGAGACGTATTCGTTGCTCATTGACACCTATATCAAGGACCCACGGGAGCGG 898058 Query 125322 AAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGG 125381 | | || ||| || || || || || |||| ||| | ||||| | ||| Sbjct 898059 GAGTATTTG---TTTGCTGCGATTGAGACTGTCCCGTGTATCAAGAGGAAGGCGGACTGG 898115 Query 125382 GTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCC 125441 | | |||||||| |||| | | | | || | | | || |||||||| || || Sbjct 898116 GCTCTCCGGTGGATATCTGACAAAAGGACGTCCTTTGGGGTGAGGCTGGTGGCGTTTGCG 898175 Query 125442 GCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGC 125501 | ||| || || || ||||| || || |||||| | || |||||| | |||||||| Sbjct 898176 GTCGTGGAAGGTATATTCTTCTCTGGGTCCTTTGCGTCGATATTTTGGTTGAAGAAGCGT 898235 Query 125502 GGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACAC 125561 || || ||||| || |||| | ||||| | || ||||||||||||| | ||| Sbjct 898236 GGCCTTATGCCAGGCTTGACTTTCTCGAACGAACTCATCAGTCGAGACGAGGGCATGCAC 898295 Query 125562 TGTGACTTTGCCATTCTACTGTTTCGC 125588 |||||||| ||| || || ||| Sbjct 898296 ACCGACTTTGCGTGTCTGCTTTTCCGC 898322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056263552920