Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 seq165 107 4e-18 seq54 107 4e-18 >seq1 Length=1832336 Score = 118 bits (130), Expect = 2e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 269132 AGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATC 269191 ||| | || || ||||| | || |||||||||||||| || ||||| ||||| | || Sbjct 898158 AGGCTGGTGGCGTTTGCGGTCGTGGAAGGTATATTCTTCTCTGGGTCCTTTGCGTCGATA 898217 Query 269192 TTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGC 269251 |||||||||||||| | |||||||||||||| || |||||||| |||||| | || || Sbjct 898218 TTTTGGTTGAAGAAGCGTGGCCTTATGCCAGGCTTGACTTTCTCGAACGAACTCATCAGT 898277 Query 269252 AGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 | ||||| || | ||| |||||| || ||| Sbjct 898278 CGAGACGAGGGCATGCACACCGACTTTGCGTGT 898310 >seq165 Length=362420 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| ||||||||||| || || || | || ||||| || || || || Sbjct 206697 GTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCG 206638 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | |||||| || ||||| || || || ||||| |||||||| | || Sbjct 206637 GCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTC 206578 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || | |||| || || ||||| || || |||||||| || || || || Sbjct 206577 ACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTC 206518 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 206517 TTGACAAAGATCTGCAT 206501 >seq54 Length=1324731 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| ||||| ||||| || || || | |||||| || || || || || Sbjct 967282 GTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCG 967223 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||| || || ||||| || || || || ||||||||||| |||| Sbjct 967222 GCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGCCTTTG 967163 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || | || || | || ||||| || || || ||||| ||||| | || Sbjct 967162 ACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTC 967103 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 967102 TTGACAAAGATCTGCAT 967086 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||||| || ||||| || || || ||||| ||||| | ||| || Sbjct 968038 AAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATC 967979 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||| || || | | ||| || || ||||| || || || || || Sbjct 967978 CTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC 967919 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || || || | || ||| || || ||||| || || || || Sbjct 967918 CTGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGT 967859 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | || || || || |||||||| Sbjct 967858 CTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393723523436