Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq215 102 6e-17 seq296 98.7 7e-16 >seq215 Length=105717 Score = 102 bits (112), Expect = 6e-17 Identities = 162/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTACTCTGCTCCGA 25795 |||||||||||| ||| |||| || || | | || ||| |||| || || | Sbjct 68976 CAGCTGATCCACGCCCTCTCCCGTATAATCCTTGTCACAA-TCCTCATACTTCGCACCAA 68918 Query 25796 AATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTG-CTCAAAG 25854 ||| |||||||| ||||| ||||| ||||| | |||||| ||| || || ||||| Sbjct 68917 AATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCCTCTCGTCTATGACTCAAC- 68859 Query 25855 CCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCG 25914 || | ||| |||||||| || || || ||||| | ||||||||||| || ||||| | Sbjct 68858 CCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAGATCTTCACGCCCTTGGCA 68799 Query 25915 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 25961 || || || |||| || | |||||||| ||||| || ||||| Sbjct 68798 GATAGAAGCTTAGAGTCCGTTGTACCTCTGACAAACCATAGGAGCTC 68752 >seq296 Length=2232338 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTACTCTGCTCCGA 25795 |||||||||||| ||| |||| || || | | || ||| |||| || || | Sbjct 1744280 CAGCTGATCCACGCCCTCTCCCGTATAATCCTTGTCACAA-TCCTCATACTTCGCACCAA 1744338 Query 25796 AATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTG-CTCAAAG 25854 ||| |||||||| ||||| ||||| ||||| | |||||| ||| || || ||||| Sbjct 1744339 AATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCCTCTCGTCTATGACTCAAC- 1744397 Query 25855 CCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCG 25914 || | ||| |||||||| || || || ||||| | ||||||||||| || ||||| || Sbjct 1744398 CCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAGATCTTCACGCCCTTGTCC 1744457 Query 25915 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 25961 || || || || | || | ||||| || |||||||| || || Sbjct 1744458 GACAGAAGCTTAGAATCCGTCGCACCTCTAACAAACCACAGAAGTTC 1744504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136285899641