Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq54 82.4 6e-11 >seq54 Length=1324731 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| || |||||| || ||||||||||||| | | || || | ||||| ||||| Sbjct 968028 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTG-CGACCATCCTCGAGCTG 967970 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || || | || || |||||||| ||| || | | ||||||||| ||| || Sbjct 967969 CTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTT 967910 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | | |||| |||| |||||| ||| | || || || || ||||| Sbjct 967909 ACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGT 967850 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | || || || || |||||||| Sbjct 967849 CAAGGTCTTGACGAAGATCTGCAT 967826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249572522317