Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq165 107 2e-18 seq54 100 3e-16 >seq165 Length=362420 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 ||| | ||| | |||||| ||||| || | |||||||||| | || || || ||| Sbjct 206992 CACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGG--AGAGAGTACGACCGTCC 206935 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || |||||||| || | ||||| | | || ||||| ||||| || || || ||||| Sbjct 206934 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCT 206875 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| ||| |||| || || ||| | |||| | | ||||| |||| |||||||| Sbjct 206874 TGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTC 206815 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || ||||||||||| Sbjct 206814 TTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 100 bits (110), Expect = 3e-16 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 94797 ACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATC 94854 |||||| ||| | |||||| ||||| || | ||| |||||| | || || | ||| Sbjct 207219 ACACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGG--AAAGGGTACGTCCATC 207162 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 || |||||||| ||| ||||||| | | || || || ||||| || ||| ||| ||| Sbjct 207161 TTCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCCTCCTT-GTC 207103 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | || || |||| ||||| ||| | |||| | | || || |||| || ||||| Sbjct 207102 CTGGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGT 207044 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || ||||| || |||||||||||||||| Sbjct 207043 CTTGCCGGTGAGAGTCTTGACAAAGATCTGCATGC 207009 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || |||||||| || | ||| ||||| | ||| |||||||||||| || || Sbjct 207432 GTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGCTGCTTGCCC 207373 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| || | || ||||| ||||||||||| || ||||| | || || | ||| Sbjct 207372 GCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGCCTTTG 207313 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || || ||| | |||||| ||||| || | || || || ||||| ||||| || Sbjct 207312 ACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGTAAGCGTC 207253 Query 94991 TTCACAAAGATCTGCATGC 95009 ||||| || || ||||||| Sbjct 207252 TTCACGAATATTTGCATGC 207234 >seq54 Length=1324731 Score = 100 bits (110), Expect = 3e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGC 94861 ||| | |||||||||||| || | || || ||| | || || || ||||| ||| Sbjct 967289 GTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGG--AGAGGGTCCGACCGTCCTCGAGC 967232 Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921 || || ||| | || || | | ||||| || ||||||||||| || ||||| | ||| Sbjct 967231 TGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATC 967172 Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981 || | |||||||| ||| | ||||| | || || || | |||||||| |||||| Sbjct 967171 TTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCA 967112 Query 94982 GTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||||||||||||| Sbjct 967111 GTCAAGGTCTTGACAAAGATCTGCAT 967086 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/212 (71%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 94799 ACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 |||||| || | ||| || ||||| || | ||| || ||| || || || || |||| Sbjct 967523 ACCAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACA-AG-GTACGACCATCC 967466 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || ||| | ||||| | | ||||| || ||||| || || || || || Sbjct 967465 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCC 967406 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||||| ||| || ||||| ||||| |||| |||||| || Sbjct 967405 TGGATCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTC 967346 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | ||| || || ||||||||||| Sbjct 967345 TTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | ||| ||||| | |||| |||||| ||||| || || Sbjct 968022 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCA 967963 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| || | ||||| || ||||| || || || ||||| | ||| || ||||| Sbjct 967962 GCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTACCCTTG 967903 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||||| ||| | ||| | ||||| |||| |||||| || || || || | || Sbjct 967902 ACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAGGTC 967843 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 967842 TTGACGAAGATCTGCAT 967826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289423646120