Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq185 111 2e-20 seq18 91.5 2e-14 seq187 86.0 1e-12 >seq185 Length=1865096 Score = 111 bits (122), Expect = 2e-20 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| |||||||||||||| ||||||||||| || ||||||||| |||| Sbjct 162605 AGGTATCACAAAGCCCGCTATCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTC 162546 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 || | ||||||| |||| |||| ||| | |||||||||||| ||| ||| Sbjct 162545 CGGTCTCATCTATGAGGAGACCCGTGGTGTCCTCAAGATCTTCCTCGAGAACGT 162492 Score = 111 bits (122), Expect = 2e-20 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| |||||||||||||| ||||||||||| || ||||||||| |||| Sbjct 337858 AGGTATCACAAAGCCCGCTATCCGTCGTCTTGCTCGTCGTGGCGGTGTCAAGCGTATCTC 337799 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 || | |||| || |||| || | ||| ||||||||||||||| ||| ||| Sbjct 337798 CGGCCTCATCTACGAGGAGACGCGAGGTGTCTTGAAGATCTTCCTCGAGAACGT 337745 >seq18 Length=1506692 Score = 91.5 bits (100), Expect = 2e-14 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || ||||||||||| ||||||||||| || ||||||||| ||||||| | |||| || Sbjct 663367 GCCATCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTGGTCTTATCTACGAG 663426 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| ||||| ||| ||||||||||| | ||| ||| Sbjct 663427 GAGACTCGTGGTGTCCTGAAGATCTTCTTGGAGAACGT 663464 >seq187 Length=1225202 Score = 86.0 bits (94), Expect = 1e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || ||||||||||| ||||||||||| || || |||||| |||| || | |||| || Sbjct 238166 GCCATCCGTCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATCTCCGGCCTCATCTACGAG 238107 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGA 16593 |||| |||| ||| | ||||||||||| ||| ||| |||| ||| Sbjct 238106 GAGACCCGTGGTGTCCTCAAGATCTTCCTGGAGAACGTCATCCGTGA 238060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074910164681