Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq58 114 3e-20 >seq58 Length=3253204 Score = 114 bits (126), Expect = 3e-20 Identities = 765/1234 (62%), Gaps = 78/1234 (6%) Strand=Plus/Plus Query 363970 ATGAAGCGCGTGGAGGC---AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026 ||||||||||| ||| | ||| || ||||| ||||| ||||| | || ||| Sbjct 1339127 ATGAAGCGCGTCGAGTCGAATGGTCAG---TGGTCGCTCTTCTGCCCGAATGAGGCTCCT 1339183 Query 364027 GGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAG 364086 |||||| || || |||||||| || | || | || ||||||||||| || |||| Sbjct 1339184 GGTCTTCATGAAGTTTGGGGTGAGGAATTTGAGGAACTCTACGAAAAGTACGAGAAGGAG 1339243 Query 364087 GGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAG 364146 || || || ||||| ||| || |||||||| |||| || ||| |||| | || Sbjct 1339244 GGCCGTGCACGCAAGACTATTGAGGCTCAGAAGCTCTGGTACGCTATCTTGGAGGCCCAA 1339303 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG-------TC 364199 |||||||| || |||| ||| ||||||| || | |||||||| || || Sbjct 1339304 ATTGAGACTGGTGGTCCCTTCATGCTGTACAAGGACGCTTGCAACCGTGAGCGTTATATC 1339363 Query 364200 C---------------------------------------------AACCAGCAGCACCT 364214 | ||||||||| |||| Sbjct 1339364 CCTTATTCATTGCCATACGTATTAACTGTTGCTCCCAGGGAAATCAAACCAGCAGAACCT 1339423 Query 364215 TGGTACAATTCAG-CAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 |||||| || || || | ||||| ||||| |||||| | || || | |||| |||| Sbjct 1339424 TGGTACTATCAAGTCATCG-AACCTGTGTACTGAGATTGTCGAGTATTCGTCTCCTGACG 1339482 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTT 364333 |||| ||||| || ||||| || || ||||| || || | || | | |||| | Sbjct 1339483 AGACCGCCGTCTGCAACCTCGCCTCCATCGCCCTCCCTTCTTTCATCGAGAATGGGGTCT 1339542 Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393 || | || | | ||||||| || | || | | ||| ||| || | | Sbjct 1339543 ACAACTTCAAGAAGTTGCATGACGTTGCCAAGGTTGTCGCGTTCAACCTCAACCGCATCA 1339602 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGA 364453 ||||| || || || || || |||||||| || || || |||||||| ||||| | Sbjct 1339603 TCGACGTCAACTACTACCCCATCCCTGAAGCACGTCGCTCGAACATGCGTCACCGCCCCA 1339662 Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATT 364513 | ||| | ||||| || || ||||| || | ||| ||| || ||| | || || | Sbjct 1339663 TCGGTGTCGGTGTGCAAGGTCTCGCGGATGCTTTCATGGCTCTGCGCATGCCCTTCGACT 1339722 Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573 ||||||| || || || || || || ||||||| || || || || || || | Sbjct 1339723 CGCCTGAAGCACGCGTCCTTAACCAGCAGATCTTCGAGACCATCTACCACGCAGCCGTTG 1339782 Query 364574 CTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 || | || |||| | | | | || ||| || || ||||| |||| Sbjct 1339783 AGGCCAGTAGCGACATGGCTGAGATCGATGGGCCCTACGAGACGTACGAGGGAAGCCCTG 1339842 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 |||| | | |||| || | ||| ||| || || || | || ||| ||| Sbjct 1339843 CAAGCAAGGGTCAGCTTCAGTACGACTTGTGGGGTGTAACTCCTTCCGACCTCTGGGACT 1339902 Query 364694 GGGATACGCTACGTTCCAACGTTAAG-----AAGCA-TGGTACTC-GCAACTCCCTCGTT 364746 ||| |||| ||| | ||| ||| |||| ||| | |||||||| | Sbjct 1339903 GGGCCTCGCT------CAAGGAGAAGGTGGCGCGCACTGGT-CTCAGGAACTCCCTTCTC 1339955 Query 364747 ACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAA 364806 || |||||||| || || ||||| ||||||||||| |||||||| || ||||| Sbjct 1339956 CTTGCTCCCATGCCTACCGCCTCTACGAGCCAGATCCTCGGTAACAACGAATGTTTCGAG 1340015 Query 364807 CCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAAT 364866 || | || ||||| | || | || || ||||| |||| || || | ||| || Sbjct 1340016 CCTTACACCAGCAACATCTACACCCGTCGCGTTCTCGCCGGCGAGTTCCAGGTTGTCTGC 1340075 Query 364867 AAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTAT 364926 | || | || || ||||| ||| |||| |||| ||||||||| Sbjct 1340076 CCTTGGCTGCTTCGCGAGCTCGTCGACCTGAAGCTCTGGGATGACCAGATGAAGAACATG 1340135 Query 364927 ATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCT 364986 ||||||||| || || ||| | |||| ||| || | || || || | ||| | Sbjct 1340136 ATCATCGCCAACAACGGGTCTATCCAGAGCATCTACGGCATCCCCGACGACGTCAAGGCG 1340195 Query 364987 ATTTACAAAACCGTATGGGAAAT-TTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045 || ||||| || || ||||| || ||| ||| || | || | || ||||| || Sbjct 1340196 ATCTACAAGACAGTCTGGGAGATCAGCCAGAAGAA-GGTCCTCGACCTCGCTGCCGACCG 1340254 Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG-ACTCAGCCAACCTCCG 365104 ||||| || || || ||||| ||| || ||||| | || | || ||| | | Sbjct 1340255 TGGTGCCTTCATTTGCCAGAGTCAGAGCTTGAACGTCCACTTGCAGTCCCCCAGTGTTGG 1340314 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAA 365138 ||| || || |||||| |||||||| ||||| Sbjct 1340315 TCAA-CTCACGAGCATGCACTTCTACGGATGGAA 1340347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348306347894