Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 141 9e-29 seq257 125 7e-24 seq54 113 4e-20 seq165 105 6e-18 seq124 86.0 6e-12 >seq1 Length=1832336 Score = 141 bits (156), Expect = 9e-29 Identities = 336/495 (68%), Gaps = 17/495 (3%) Strand=Plus/Minus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAG-CAGCACCGCGACTTTCGCCGAGCG 46157 ||||| |||||||||| || ||||||| ||| || | | || | ||||||||||| Sbjct 896167 AAGAAGGCCGACTGGGCCCTGCGCTGGATCA-CAGACAAGAACTCGTCCTTCGCCGAGCG 896109 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | | || ||||| || || ||||| |||| || || ||| || ||| | ||||| Sbjct 896108 TCTCGTCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTT 896049 Query 46218 TTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCG 46277 | |||| | ||| | ||||| || || || || ||||||||| || || Sbjct 896048 CTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCAGCCG 895989 Query 46278 CGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTA-TAACAC-TCGCGTGCACGAC 46335 ||||||||| |||| || |||||||| || ||| || | ||| || | || || | Sbjct 895988 TGACGAGGGCATGCACACCGACTTTGCCTGCCTCCTCTTCTCCCACCTCAGGCGC-CGTC 895930 Query 46336 AAGCTTGCGCCCGACACCGTGCT---GAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAG 46392 || | |||||| ||| | || ||| || ||||| || ||||| ||| || Sbjct 895929 ---CTCAC-CCCGACGTCGTCCGCCAGATCATCGTC---GAGGCCGTCGCCATCGAGCAG 895877 Query 46393 GAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGC 46452 ||||| | |||| ||| || |||| | || | ||||||||||| ||| |||||| Sbjct 895876 GAGTTCCTGACGGACGCGCTCCCCGTCTCTCTCATCGGCATGAACGCGAAGTTGATGTGC 895817 Query 46453 GACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGC-AGCTTCACCAGCCGAAGCATTT 46511 | ||||||||||| || |||||||| ||||| |||| |||| | || ||| | Sbjct 895816 CAGTACATCGAGTTCGTCGCGGACCGTCTGCT-GTGCGCGCTTGGTAACGAGAGGCACTA 895758 Query 46512 TCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTT 46571 || || || || || || || ||| | | ||||| || ||||||| || || || Sbjct 895757 CAACTCGACGAACCCCTTCGATTTCATGGATATGATCTCGCTCCAGGGCAAGACCAACTT 895698 Query 46572 TTTCGAAAAGCGCGT 46586 ||||| ||||| || Sbjct 895697 CTTCGAGAAGCGTGT 895683 >seq257 Length=1005854 Score = 125 bits (138), Expect = 7e-24 Identities = 101/122 (83%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||| |||||||| || |||||||| |||||| Sbjct 387524 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 387465 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||||||| Sbjct 387464 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGG 387405 Query 131128 AT 131129 || Sbjct 387404 AT 387403 >seq54 Length=1324731 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| || ||| || ||||| ||||||||||| Sbjct 967510 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCG 967451 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||||||| |||||||| || || || || ||| || |||| Sbjct 967450 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTG 967391 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | ||| | || || | ||||||| || | || | || || ||||| | ||| Sbjct 967390 ACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTC 967331 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 967330 TTGACGAAGATCTGCAT 967314 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||||| || ||||||||||| Sbjct 968052 CCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAA 967993 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| || |||||||||||||||||| Sbjct 967992 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGG 967933 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| ||| | | |||| ||||||| Sbjct 967932 ATGCCCTCCTTGTCCTGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACC 967873 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| | || || ||||| |||||||| Sbjct 967872 TCAAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| |||||||| ||||||||||| || Sbjct 967824 CCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 967765 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| ||| |||| | |||||||||||| |||||| Sbjct 967764 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 967705 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | ||| | | || | ||||||| Sbjct 967704 ATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACC 967645 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| | || || ||||| |||||||| Sbjct 967644 TCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| || || ||||| ||| | ||| || |||||| ||||||||||| Sbjct 967282 GTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCG 967223 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC--T 131155 ||| | || | |||||||||||||||||| || || || ||||| ||| | | ||| | Sbjct 967222 GCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTC-CTGAATCT-TGCCTT 967165 Query 131156 TGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAG 131215 ||| ||| | | || | |||||| | |||| || | ||| || || || | | Sbjct 967164 TGACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGG 967105 Query 131216 TTTTTACGAAAATCTGCAT 131234 | || || || |||||||| Sbjct 967104 TCTTGACAAAGATCTGCAT 967086 >seq165 Length=362420 Score = 105 bits (116), Expect = 6e-18 Identities = 165/232 (71%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||| ||| | || | || |||||||| ||||||||||||||| Sbjct 207235 GCCTCCACGGAGACGCA-CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGA 207177 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || || || ||||| ||||| || |||| | ||||| ||||||||||| Sbjct 207176 AAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGG 207117 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||| | ||| | | | |||| |||||| | Sbjct 207116 GATGCC-TCCTTGTCCTGGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAAC 207058 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| || ||||| ||||| || || || ||||||||| || Sbjct 207057 TTCAAGGGT-ATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCATGCCT 207007 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||| ||||| || ||||||||||| | ||||| ||||| ||||||||||| Sbjct 207432 GTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGCTGCTTGCCC 207373 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || ||||| || || ||||| || || || ||||| ||| || ||| Sbjct 207372 GCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGCCTTTG 207313 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | ||| | | | || | ||||||| |||| ||||| || || || || || || Sbjct 207312 ACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGTAAGCGTC 207253 Query 131218 TTTACGAAAATCTGCATGACT 131238 || ||||| || |||||| || Sbjct 207252 TTCACGAATATTTGCATGCCT 207232 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || || || || ||| | ||| || || || ||||||||||| Sbjct 206698 GGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCC 206639 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | |||||| ||||| |||||||| || || || || || || ||| Sbjct 206638 GGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTT 206579 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | ||| | | |||| | ||||||| || | ||| | || || ||||| ||||| Sbjct 206578 CACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGT 206519 Query 131217 TTTTACGAAAATCTGCATGACT 131238 || || || ||||||||| || Sbjct 206518 CTTGACAAAGATCTGCATGCCT 206497 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | |||||| || | || | || |||||||| ||||||||||||||| Sbjct 206500 GCCTCCACGGAGACGCAGAACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGA 206441 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||||| ||||| || ||||| || ||| |||| | ||||||||||| || || Sbjct 206440 GAGGGTGCGCCCATCCTCAAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGG 206381 Query 131127 GAT 131129 || Sbjct 206380 AAT 206378 >seq124 Length=638099 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| || || | || |||||||| ||||||||||| ||||||| ||| || Sbjct 263055 CGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCA 263114 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||||| |||||||| || || |||| | ||| || ||||||||||| || Sbjct 263115 TCCTCGAGCTGCTTTCCAGCAAAGATGAGACGTTGTTGGTCCGGAGGAAT 263164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010929649280