Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 >seq1 Length=1832336 Score = 131 bits (144), Expect = 2e-25 Identities = 292/434 (67%), Gaps = 7/434 (2%) Strand=Plus/Minus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| || || ||| ||| | |||||||||| ||| || | |||||| || || || Sbjct 898313 CAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGT 898254 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 | || ||||| ||||||||||| || | ||||||||| |||||||| || ||||| || Sbjct 898253 CAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAA 898194 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC--GCTGTC 32833 ||| || ||||| || ||||||| || | || ||| | ||| | || | |||| Sbjct 898193 GAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTTTTGTC 898134 Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 | ||||||| ||||||| || |||||| | || | ||| || | ||||| || || Sbjct 898133 AGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGC 898074 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTA 32951 | ||| | ||| | || || || | ||| || ||||| | || || | Sbjct 898073 AGCAAACAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGA--A 898016 Query 32952 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCG 33011 ||| | || || || | ||| || || || || || |||||||| || | |||||| Sbjct 898015 TACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCCTCG 897956 Query 33012 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 33071 | | || || || | | || || || | | ||||| ||||| || ||||| | Sbjct 897955 GCGACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTCGGAG 897896 Query 33072 GCTGCAAAAAACGC 33085 || || || || || Sbjct 897895 GCGGCGAAGAAGGC 897882 Score = 111 bits (122), Expect = 2e-19 Identities = 383/589 (65%), Gaps = 10/589 (2%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| | |||||||| | || || | |||||||| || ||||| Sbjct 895959 CAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGA 896018 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| ||||||||||| || ||||| || || || || || || || || ||||| Sbjct 896019 CCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAG 896078 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGC-TGTCATGT 32837 || || || || || || ||||| | || | ||| | | || | | |||| ||| Sbjct 896079 ATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTC-TGT 896137 Query 32838 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | ||||| ||||||||||| || | || || || ||||| || || | Sbjct 896138 GATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTC 896197 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 ||||| || | | || || || | || || || || | || || | Sbjct 896198 GAAGAGGTATTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGT 896257 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 || || || ||||| || || || || || ||||||||||| | ||||||| Sbjct 896258 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGC 896317 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 ||| || || | | ||||| || | | || || || || || ||||| ||| || Sbjct 896318 CTGCACCTCGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGC 896377 Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTATT---CC 33132 || || || | || || || || | |||| || ||| || || || || Sbjct 896378 GAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGT-TGTCGTTGAGCTTCTTCTCCC 896436 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || | || || || | |||| || || ||||||| || || ||||| |||| Sbjct 896437 AGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCT 896496 Query 33193 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 | || ||||| | |||||| ||||| ||||| || || || | ||| || Sbjct 896497 TCTTGTACATTTGCCAGATCTCATGGTATTGGATAGGGAATAGAACGAA 896545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629489233200