Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq165 116 3e-21 seq54 102 7e-17 >seq165 Length=362420 Score = 116 bits (128), Expect = 3e-21 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | ||||| || |||| || | ||||| ||||| || Sbjct 207011 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCAT-ACCCTTGAAGTTGAGTCCTCC 207069 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||| ||||||| | ||||| || ||| ||||| || || || || || |||||| Sbjct 207070 GACAGTATCGAGGCCGTGAAGGGCAAGATCCAGGACAAGGA-GGCATCCCTCCGGACCAA 207128 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || |||||||||||||| | ||||||| || || | ||||||||| Sbjct 207129 CAGCGCCTGATCTTTGCCGGCAAACAGCTCGAAGATGGACGTACCCTTTCCGATTACAAC 207188 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || || || || Sbjct 207189 ATTCAGAAGGAGTCTACTCTCCA 207211 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || ||||| | || || || | || || |||| || ||||| ||| Sbjct 207236 ATGCAAATATTCGTGAAGACGCTTACGGGAAAGACAATTACCCTCGAGGTCGAGTCTTCT 207295 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||| ||||||| | | || || ||| ||||| || || ||||| || || ||| Sbjct 207296 GACAGTATCGAGGCTGTCAAAGGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 207355 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || ||||| || | || |||| ||||| | |||||||| Sbjct 207356 CAGCGCTTGATCTTCGCGGGCAAGCAGCTGGAGGATGGACGCACGTTATCGGATTACAAC 207415 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || ||||| ||||| ||| Sbjct 207416 ATCCAGAAGGAATCGACGCTTCAT 207439 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | ||||| || | ||||| | || || ||||| ||| Sbjct 206501 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACTATCACCCTTGAGGTCGAGTCTTCT 206560 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || | ||| ||| | ||||| || || || || || || || || || |||||| Sbjct 206561 GATAGTATTGAGGCGGTGAAGGGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAA 206620 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || |||||||| || | ||||||| || || | ||| || ||| Sbjct 206621 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGTACCCTTTCCGACTATAAT 206680 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 206681 ATCCAGAAGGAGTCTACCCTTCA 206703 >seq54 Length=1324731 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| || | ||||| | || || ||||| ||| Sbjct 967314 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCT 967373 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||| |||||||| | | ||| || ||| || || || || || || || ||||| Sbjct 967374 GACTCTATCGAGGCCGTCAAGGGCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAG 967433 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || |||| ||| || || ||| ||||| Sbjct 967434 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGTCCGACTACAAC 967493 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || || || || || ||| Sbjct 967494 ATCCAGAAGGAGTCGACTCTTCAT 967517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326325864355