Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 >seq1 Length=1832336 Score = 170 bits (188), Expect = 2e-37 Identities = 389/582 (67%), Gaps = 5/582 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | || ||||| || || | ||| ||| ||| || | Sbjct 895958 GCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAG 896017 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | ||| || || ||||||||||| || || || || || || || || || Sbjct 896018 ACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAA 896077 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT-ACTGC 93269 ||||| || ||||| || || || || | ||| ||||| || | | || ||| Sbjct 896078 GATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTCTG- 896136 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 ||||||| | ||||| ||||| || ||||| || || || | || ||||| |||| Sbjct 896137 TGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGT 896196 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 || ||||| || |||| | | || ||||| || ||||| | || || || Sbjct 896197 CGAAGAGGTATTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATG 896256 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || |||| |||||||| || ||||| |||||||| || | || || | | Sbjct 896257 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGG 896316 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||||| || | || |||| ||| ||||| || || ||||| ||||| ||||| || | Sbjct 896317 CCTGCACCTCGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAG 896376 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCCC 93566 | || || || | | || || || || ||| | || || || ||| |||| Sbjct 896377 CGAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCC 896436 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | ||| | || || || || || | || || | ||||| || || || || || | Sbjct 896437 AGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCT 896496 Query 93627 TTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668 | |||||||| | ||| || || || ||||| || || |||| Sbjct 896497 TCTTGTACATTTGCCAGATCTCATGGTATTGGATAGGGAATA 896538 Score = 125 bits (138), Expect = 8e-24 Identities = 290/436 (67%), Gaps = 16/436 (4%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 |||||||||||||| || | || |||||||| || | || || ||| || || Sbjct 898309 CACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAG 898250 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || || || ||||| | ||||||||| || ||||| ||||| || ||| Sbjct 898249 CCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAAGAAT 898190 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 |||||||||||| | ||||| ||||| | | | |||| ||| | || || Sbjct 898189 ATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAA------GGACGTCCTTTTG 898136 Query 93272 ------ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATA 93325 ||||| | |||||| || || || |||| ||||| || | || || || Sbjct 898135 TCAGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATC 898076 Query 93326 GCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGATTAACAGAG 93383 || ||| | || || ||||| ||| || | || || || || || | || | Sbjct 898075 GCAGCAAACAAATACTCCCGCTC--CCGTGGGTCCTTGATATAGGTGTCAATGAGCAACG 898018 Query 93384 AATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTT 93443 ||||| | || || || || |||||||| || ||||| ||||||||||| | || | Sbjct 898017 AATACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCCT 897958 Query 93444 CCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGG 93503 | | || || || || | || || | ||| ||||| ||||| || || || || |||| Sbjct 897957 CGGCGACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTCGG 897898 Query 93504 ATGCTGCaaaaaaaGC 93519 | || || || || || Sbjct 897897 AGGCGGCGAAGAAGGC 897882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858593439080