Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq165 122 7e-23 seq54 116 3e-21 >seq165 Length=362420 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | ||||| || || |||| |||||||| || || || Sbjct 206783 ATGCAGATCTTCGTTAAGACGCTCACCGGCAAGACCATCACCCTTGAAGTCGAGTCCTCC 206842 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | || | | | || ||| ||||||||||||||||| || || ||||||||| Sbjct 206843 GACAGTATCGAGGCTGTTAAGGGAAAGATTCAAGACAAGGAGGGCATCCCTCCCGATCAA 206902 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||||||| | ||||| || || |||||||||| ||| Sbjct 206903 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGACGGTCGTACTCTCTCCGATTATAAC 206962 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 206963 ATCCAGAAGGAGTCTAC 206979 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/200 (72%), Gaps = 8/200 (4%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || | || |||||||| || || || Sbjct 207011 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCAT-ACCCTTGAAGTTGAGTCCTCC 207069 Query 22279 GA---TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 || || || || || | || || || || |||||||||| || || || || Sbjct 207070 GACAGTATCGAGGCCG---TGAAGGGCAAGATCCAGGACAAGGAGGC-ATCCCTCCGGAC 207125 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| || || || ||||||||||||||| | || ||| || ||| | ||||||||| Sbjct 207126 CAACAGCGCCTGATCTTTGCCGGCAAACAGCTCGAAGATGGACGTACCCTTTCCGATTAC 207185 Query 22396 AACATTCAAAAAGAATCCAC 22415 |||||||| || || || || Sbjct 207186 AACATTCAGAAGGAGTCTAC 207205 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || | || || || || || | | Sbjct 207236 ATGCAAATATTCGTGAAGACGCTTACGGGAAAGACAATTACCCTCGAGGTCGAGTCTTCT 207295 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | || | | ||||| || || || ||||||||||||||||| ||||||||| Sbjct 207296 GACAGTATCGAGGCTGTCAAAGGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 207355 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | |||||| ||||| | || ||||||||| Sbjct 207356 CAGCGCTTGATCTTCGCGGGCAAGCAGCTGGAGGATGGACGCACGTTATCGGATTACAAC 207415 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 207416 ATCCAGAAGGAATCGAC 207432 >seq54 Length=1324731 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || ||||||| || || || || | Sbjct 967086 ATGCAGATCTTTGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCT 967145 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||||| || ||||| ||||||||||||||||| || || || Sbjct 967146 GACTCCATCGAGGCCGTCAAAGGCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 967205 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || |||||||| ||| | ||||| || ||| ||||||| ||||| Sbjct 967206 CAGCGTCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGGACCCTCTCCGACTACAAT 967265 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 967266 ATCCAGAAGGAATCTAC 967282 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||| || || || || | | Sbjct 967598 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACTATCACGCTCGAGGTCGAGTCTTCT 967657 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||| || || ||||||||||| || || ||||| || Sbjct 967658 GACTCCATCGAGGCCGTGAAGGGAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 967717 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| ||| || | || || |||||| Sbjct 967718 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACTCTTTCTGACTACAAC 967777 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || |||||| | ||| | || | || | || |||||| Sbjct 967778 ATTCAGAAGGAGTCCACCCTTCATCTTGTCCTCCGTCTCCGTGGAGGT 967825 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || ||| |||| ||||| || || | || Sbjct 967826 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCC 967885 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || ||||| ||||||||||| || || || || || Sbjct 967886 GACTCCATCGAGGCCGTCAAGGGTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 967945 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | |||||| ||||| | || ||||||||| Sbjct 967946 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTACAAC 968005 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 968006 ATCCAGAAGGAGTCTACC 968023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726378407105