Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 147 4e-30 seq58 140 7e-28 seq255 136 8e-27 seq313 114 3e-20 >seq1 Length=1832336 Score = 147 bits (162), Expect = 4e-30 Identities = 572/879 (65%), Gaps = 35/879 (4%) Strand=Plus/Plus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 || || || ||||| |||||||| || | |||||||| || ||||| | |||||| Sbjct 895674 TAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATATCCATG 895733 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCT-AC-GAAGATGC 251662 || ||||||||||| || | ||||| ||| | | ||||| || || | ||| | Sbjct 895734 AAATCGAAGGGGTTCGTCGAGTTGTAGTGCCTCTCGTTACCAAGCGCGCACAGCAGA--C 895791 Query 251663 GGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATAC-GA 251721 |||| || || ||||| | ||||| | ||||| | | ||||||||| || | | || Sbjct 895792 GGTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCATGCCGATGAGAGAGA 895851 Query 251722 CAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATT--G 251779 | ||| || || | ||| |||| ||| |||| || ||||| | | || | Sbjct 895852 CGGGGAGC-GCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATCTGG 895910 Query 251780 CCTTC-ACCTGTGCCAGAG-ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAA 251837 | | || | | ||| || || | || | ||| | ||||| | |||| Sbjct 895911 CGGACGACGTCGGGGTGAGGACGGCGCCTG----AGGTGGGAGAAGAGGAGGCAGGCAAA 895966 Query 251838 CTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCAT 251897 | ||||| |||||||| || ||||||| ||||||||| | || |||||||| Sbjct 895967 GTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCAT 896026 Query 251898 CACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTC 251957 || ||||| ||| ||||||||||||| | | ||||| || ||||| | | |||||| Sbjct 896027 CAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTC 896086 Query 251958 GACACACACCCATGCAACAAGGCGCTCAGCAAACGA------CTTGTCCTGCGA-CAAGA 252010 ||| | | || || || ||||| || || || ||||| ||| || | || Sbjct 896087 GACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGT-CTGTGATCCAG- 896144 Query 252011 ACTTCTGTGCCCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGA 252070 | | ||||| | |||||||| | |||||| || ||||| || || |||| Sbjct 896145 --CGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGA 896202 Query 252071 GAGAGTTCCGCTCGGCAT--CGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTC 252128 | | | ||| | || | ||||| |||| | || | ||||| ||||| |||| Sbjct 896203 GGTA--TTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTC 896260 Query 252129 CGAATGGATGGATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGT 252188 || |||||| || | | |||||| || | ||||| |||||| | | | Sbjct 896261 GGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGCCTG 896320 Query 252189 GACTTCCGTGGAAAAGTTGTTTG-CAATGTTCTCCATCACCATGCCATCGCTGCCTGCAA 252247 || || |||| || | | | | | | |||||| | || || || ||| | | || | Sbjct 896321 CACCTCGTTGGAGAA-TCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGCGA 896379 Query 252248 AGAAGCCAAGAATGGTCTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGT 252307 ||||| |||| | | ||||||||| ||||| | |||||||||||| | ||||| Sbjct 896380 AGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCCAGT 896439 Query 252308 CGGCAATGTCCTGATTCAGAGGAACTTCT--TCCACCGTCCAGAATGTGGACACCGCCTT 252365 || ||||| | ||||| | ||| || | |||||||| | || | | ||||| Sbjct 896440 CGTGCTGGTCCT--TGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCTT 896497 Query 252366 CTTGTACATTGCGAACACATCAGGGTACTTGATTGGGAA 252404 |||||||||| | | ||| |||| | ||| ||||| Sbjct 896498 CTTGTACATTTGCCAGATCTCATGGTATTGGATAGGGAA 896536 >seq58 Length=3253204 Score = 140 bits (154), Expect = 7e-28 Identities = 475/724 (66%), Gaps = 31/724 (4%) Strand=Plus/Minus Query 293041 CCCTTCTTCCATGCGTAGAACAGCATAGATGTCA-TAGACTT-CAGTGTGGGAGTGGCCA 293098 |||||||||||| ||||||| |||| || | | ||| || || |||| || || Sbjct 1340353 CCCTTCTTCCATCCGTAGAAGTGCATGCTCGTGAGTTGACCAACACTGGGGGACTG--CA 1340296 Query 293099 GGAAAAGGTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAA 293158 | | ||||| |||||| |||| | ||||||||||| || ||||||||||| | Sbjct 1340295 AGTGGACGTTCAAGCTCTGACTCTGGCAAATGAAGGCACCACGGTCGGCAGCGAGGTCGA 1340236 Query 293159 TCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAA 293218 || ||||| ||||||||| ||||||||| | |||||||| || | | Sbjct 1340235 GGACCTTCTTCTGGCTGATCTCCCAGACTGTCTTGTAGATCGCCTTGACGTCGTCGGGGA 1340176 Query 293219 TGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGG 293278 |||| | ||||||||||||| |||||| || ||| ||||||||| || Sbjct 1340175 TGCCGTAGATGCTCTGGATAGACCCGTTGTTGGCGATGATCATGTTCTTCATCTGGTCAT 1340116 Query 293279 ACCA-AGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCA 293337 ||| || || | | | ||||||||| | || ||| | |||||| ||||||| Sbjct 1340115 CCCAGAGCTTCA-GGTCGACGAGCTCGCGAAGCAGCCAAGGGCAGACAACCTGGAACTCG 1340057 Query 293338 CCAGCGAGAGTGCGACGGCTGTAAATGTTCGAAGTGATGG-GTTCGGCTGCCTCAACAGA 293396 || |||||| ||||||| |||| |||| || ||| || |||| | |||| Sbjct 1340056 CCGGCGAGAACGCGACGGGTGTAGATGT------TGCTGGTGTAAGGCT--CGAAACATT 1340005 Query 293397 C-------CCGCAAATCTGAGCAGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGT 293449 | ||| ||||| ||||| ||||||||||| ||||| || |||| Sbjct 1340004 CGTTGTTACCGAGGATCTGGCTCGTAGAGGCGGTAGGCATGGGAGCAAGGAGAAGGGAGT 1339945 Query 293450 TCCTCACACC-CTTCTTGACAC--GCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTG- 293504 |||| | ||| | | | ||| | | ||| ||||||| |||||| ||| | Sbjct 1339944 TCCTGAGACCAGTGCGCGCCACCTTCTCCTTGAGCGAGGCCCAGTCCCAGAG--GTCGGA 1339887 Query 293505 AGGTGTAACACCCCAGAGATGATACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAA 293564 ||| || |||||||| | | ||||| | ||||||||| ||||| ||||| | Sbjct 1339886 AGGAGTTACACCCCACAAGTCGTACTGAAGCTGACCCTTGCTTGCAGGGCTTCCCTCGTA 1339827 Query 293565 GGTGGGATGGGGGCCAT-GCTCATCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGT 293623 || | ||| |||| | || |||| | |||| | |||||||| || || || Sbjct 1339826 CGTCTCGTAGGGCCCATCGATC-TCAGCCATGTCGCTACTGGCCTCAACGGCTGCGTGGT 1339768 Query 293624 AAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCT 293683 | ||| ||||||||||| |||| || ||| || | ||||| || ||||| Sbjct 1339767 AGATGGTCTCGAAGATCTGCTGGTTAAGGACGCGTGCTTCAGGCGAGTCGAAGGGCATGC 1339708 Query 293684 TCAGCTGGAAGAACACATCCTGCAGACCCTGTACACCTACACCAACGGGGCGACGACGCT 293743 ||| | ||| ||||| ||||| || ||||| ||||| | |||||| ||||| Sbjct 1339707 GCAGAGCCATGAAAGCATCCGCGAGACCTTGCACACCGACACCGATGGGGCGGTGACGCA 1339648 Query 293744 TGTT 293747 |||| Sbjct 1339647 TGTT 1339644 >seq255 Length=1613832 Score = 136 bits (150), Expect = 8e-27 Identities = 246/352 (70%), Gaps = 6/352 (2%) Strand=Plus/Plus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 ||||||| || | ||| ||| | ||||||| | | || || ||||| ||||| | Sbjct 617236 AGGTCGCCCAACTAGTTGGCTATATTTCCGAAAAGGCAGCGTATCACCACGGCGAGCAAA 617295 Query 218717 GTCTGCAGGGTG-CCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 || || | | || |||| || | |||| || ||||| | |||||||||||||| ||| Sbjct 617296 GTTTG-ATGATGACCATCGTCAACTTGGCGCAAGACTACATCGGCAGTAACAACATCAAC 617354 Query 218776 TTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCT 218835 ||||| | || || ||||| || ||| ||||| ||| || || ||| ||| ||| Sbjct 617355 TTGCTCATGCCGAATGGTCAATTCGGTACTCGTGATCAGGGCGGTAAAGATCATGCCTCT 617414 Query 218836 GCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGAT 218895 || ||||||||||| || || |||| || | || ||||| ||| | ||| Sbjct 617415 GCGAGGTATATCTTCACCGAGCCGTCGTTGATGGCCCGTACACTGTTCCATCCTGGCGAC 617474 Query 218896 GATGTGCTCCTTAAGTATCTTG-AGGACGAT-GGTTCTTCGATTGAGCCCGAGTGGTATG 218953 ||| |||||||| || |||| |||| ||| ||| | ||||| |||||||||||| Sbjct 617475 GATCCTCTCCTTAACTA-CTTGAAGGATGATACGTTGGAC-ATTGAACCCGAGTGGTATA 617532 Query 218954 TGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGG 219005 |||| | ||||| | | ||||| || ||||| | |||||||| || || Sbjct 617533 TGCCCGTCATTCCTATGATCCTCGTCAACGGTGCTGAGGGTATCGGTACTGG 617584 >seq313 Length=2003938 Score = 114 bits (126), Expect = 3e-20 Identities = 150/204 (74%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || |||||||| | || ||||||||||| |||| |||| | || || ||| || || Sbjct 1478330 GGTCCCAATGGATCCGGAAAGTCTACCCTCGTCAAGCTCCTCATCGGTGATACCGAGCCC 1478271 Query 280239 A-CTGAGG-GGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | ||| || ||| | | ||||||||||| ||| | || | ||||||||||||||| Sbjct 1478270 AACTGCGGTGGTGAGGTCTGGAAGCATCCTAACCTTGTCATCGGCTACGTCGCTCAGCAC 1478211 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| |||||| |||| ||||||| | | ||||| |||||| Sbjct 1478210 GCCTTCCACCACATCGACTCCCACCTCGACAAGACTCCTCTCGAGTACATGTTGTGGCGT 1478151 Query 280356 TATGCAAGTGGGCAGGATCTGGAG 280379 || | ||| ||||||| ||| Sbjct 1478150 TACCAGACTGGTGAGGATCTCGAG 1478127 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765 |||| |||||||||||||||||||| || || | |||||||| | | || || Sbjct 1478806 TGTCAGGTGGTTGGAAGATGAAGCTCGCGCTTGCGCGCGCCATGTTGTTCAAGGCTGACA 1478747 Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825 |||| ||||||||||||| || |||||| ||||| | |||||| || ||||| | | Sbjct 1478746 TCCTCTTGCTTGATGAGCCTACGAACCACTTGGACGTCGTCAACGTCGCTTGGCTCGAGA 1478687 Query 279826 CCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || || | | ||||| |||| ||||| |||||||| |||||| Sbjct 1478686 ACTACCTCACTTCCCTCACCACCTGCACTTCCATCATCGTCTCGCACGACTCCGGCTTC 1478628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832625376597