Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq165 122 7e-23 seq54 100 2e-16 seq124 98.7 8e-16 >seq165 Length=362420 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || ||||| |||||| | ||||||| || ||||| ||||| ||| Sbjct 206979 GTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCCTCAAGCTGTTTGCCA 206920 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||||||||| || ||||| ||||| || ||||| ||||||| || Sbjct 206919 GCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTGAATCTTTCCCTTA 206860 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | || | |||||| ||| ||||| || | ||| | || |||||||| || || Sbjct 206859 ACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTCTTGCCGGTGAGCGTC 206800 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 206799 TTAACGAAGATCTGCAT 206783 Score = 107 bits (118), Expect = 2e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || ||||||||||||||| | ||||| |||||| || ||||| || Sbjct 207205 GTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCGAGCTGTTTGCCG 207146 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || ||||||||||||||||| ||||| || ||||| ||||| || Sbjct 207145 GCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTGGATCTTGCCCTTC 207087 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | || | |||||| ||| || || || | ||| | || |||||||| ||||| Sbjct 207086 ACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTGCCGGTGAGAGTC 207028 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||| ||||||||| || Sbjct 207027 TTGACAAAGATCTGCATGCCT 207007 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || || || || ||| | ||||| ||||||||| || || || Sbjct 206697 GTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCG 206638 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||||||||| ||||| ||||| || || || |||||| || Sbjct 206637 GCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTC 206578 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| | || | || ||||| || | ||| | || |||||||| ||||| Sbjct 206577 ACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTC 206518 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||| ||||||||| || Sbjct 206517 TTGACAAAGATCTGCATGCCT 206497 >seq54 Length=1324731 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | ||| | || | ||||| || || || ||||||||||| Sbjct 968053 ACCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGA 967994 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| ||| ||| || || || || |||||| |||| | ||||| ||||||||||| Sbjct 967993 AAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGG 967934 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || ||||| |||||| || | || | || ||||| || ||||| Sbjct 967933 GATGCCCTCCTTGTCCTGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGAC 967874 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||| |||||||||| || || || || |||||||| Sbjct 967873 CTCAAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | || || || || ||||||||||| || Sbjct 967827 ATACCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCA 967768 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| || || || || |||||| ||||||||||||| ||||| ||| Sbjct 967767 GAAAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGA 967708 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| |||||| || | || | || ||| | || ||| Sbjct 967707 GGGATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCG 967648 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||||| || || || || |||||||| Sbjct 967647 ACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || |||||| ||| || || || || || Sbjct 967510 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCG 967451 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| ||||| ||||| || || || ||||| || Sbjct 967450 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTG 967391 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | || | | ||| | || ||||| || | || | ||| |||||||||| ||| Sbjct 967390 ACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTC 967331 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 967330 TTGACGAAGATCTGCAT 967314 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | |||||||| || || || ||||| ||| Sbjct 967315 ATACCTCCACGAAGACGGAGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCG 967256 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| || || || || || || ||| | || |||||||| ||||||||| Sbjct 967255 GAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGA 967196 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| ||| | || | || ||| | ||| || Sbjct 967195 GGAATACCCTCCTTGTCCTGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCA 967136 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || |||| || || ||||| |||||||| Sbjct 967135 ACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 >seq124 Length=638099 Score = 98.7 bits (108), Expect = 8e-16 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || ||||||||||| ||||||| |||||| ||| || || || || ||| Sbjct 263073 GTAGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCATCCTCGAGCTGCTTTCCA 263132 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGC 114279 || |||||||||| ||||||||||||||||||| Sbjct 263133 GCAAAGATGAGACGTTGTTGGTCCGGAGGAATGC 263166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132776837004