Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 482 4e-131 seq58 158 2e-33 >seq1 Length=1832336 Score = 482 bits (534), Expect = 4e-131 Identities = 628/858 (73%), Gaps = 14/858 (2%) Strand=Plus/Minus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 |||| || |||||| |||||||||||||| || |||| |||||| || ||||||| Sbjct 896523 ACCATGAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACAGCAGAGGAGA 896464 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTG-TCT--GAGAACGAAAAGTTTT 42408 | ||||| |||||||| | || ||||||| | || || ||||| | Sbjct 896463 TGGACCTCTCCAAGGACCAGCACGACTGGGAGAAGAAGCTCAACGACAACGAGCGCCACT 896404 Query 42409 TCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGG 42468 || || || | || ||||||||||| ||||| ||||| || ||||| |||||||| | Sbjct 896403 TCATCTCCCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAGAACCTCG 896344 Query 42469 CCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGA 42528 | | ||| || ||||||||| | |||||||| ||||||||||| ||||||| Sbjct 896343 TCGAGCGATTCTCCAACGAGGTGCAGGCCGCCGAGGCGCGTTGCTTCTACGGTTTCCAGA 896284 Query 42529 TAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGG 42588 | || |||||| | ||||| ||| ||| || || || |||| |||||| || Sbjct 896283 TCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAGG 896224 Query 42589 ATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGA 42648 | ||| |||| | || ||| | ||||| ||||| || |||||||||||||||| Sbjct 896223 ACCCCAAGCAGCGCGAATACCTCTTCGACGCCATCGAGACCATCCCCTGCATCAAGAAGA 896164 Query 42649 AGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTG 42707 |||| |||||||| || ||||||| | || | || | | | |||| |||| | || Sbjct 896163 AGGCCGACTGGGCCCTGCGCTGGATC-ACAGACAAGAACTCGTCCTTCGCCGAGCGTCTC 896105 Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 || ||||| ||||||||||||| ||||||||||| ||| |||||||||| ||||||||| Sbjct 896104 GTCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGG 896045 Query 42768 CTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 |||||| || ||| | |||||| || ||||||||||| ||||| ||||||||| | | Sbjct 896044 CTCAAGAAGC--GTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCAGCCGTG 895987 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 ||||||| |||| | ||||||||||||||||| ||||| ||||||||||| | | Sbjct 895986 ACGAGGGCATGCACACCGACTTTGCCTGCCTCCTCTTCTC---CCACCTCAGGCGC-CGT 895931 Query 42886 CCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||| || ||||| |||||| |||||||| | |||||| |||||||| Sbjct 895930 CCTCACCCCGACGTCGTCCGCCAGATCATCGTCGAGGCCGTCGCCATCGAGCAGGAGTTC 895871 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 || ||| | |||| ||||| || || ||||||||||| | | |||||| ||||| Sbjct 895870 CTGACGGACGCGCTCCCCGTCTCTCTCATCGGCATGAACGCGAAGTTGATGTGCCAGTAC 895811 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACG 43064 ||| ||| |||||| |||| ||| |||||| | | ||| | | | ||||||| || Sbjct 895810 ATCGAGTTCGTCGCGGACCGTCTGCTGTGCGCGCTTGGTAACGAGAGGCACTACAACTCG 895751 Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 || ||||||||| || ||||| | |||||| | |||||||||||||||| |||||| Sbjct 895750 ACGAACCCCTTCGATTTCATGGATATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAG 895691 Query 43125 AAGCGCGTCGCCGACTAC 43142 ||||| || | |||||| Sbjct 895690 AAGCGTGTTTCGGACTAC 895673 Score = 181 bits (200), Expect = 2e-40 Identities = 392/579 (68%), Gaps = 27/579 (5%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||| | || || |||| |||||||||||| ||||| ||||| Sbjct 897753 ATCTGGCGCATGTACAAACAAGCCGAGGCCTCCTTCTGGACCGCCGAAGAGATAGACCTC 897812 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA-GAAC---GAAAAGTTTTTCCTCAA 42415 | | ||| | || |||| | || | || | | || ||| ||| || Sbjct 897813 GGACACGACCTAGTCGACTGGAACG-ACCGCCTCACGCACCCCGAACGCACCTTCATCTC 897871 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || ||||||||||||||||| |||||||| || || || ||||| | | | Sbjct 897872 GCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTGAACGAAAACCTCGTCGAGCG 897931 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| || || || || | ||||||||||| |||||||| |||||||| || Sbjct 897932 GTTCTCCAACGACGTCCAAGTCGCCGAGGCGCGCTGTTTCTACGGGTTCCAGATCATGAT 897991 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||||||||||| ||| ||| | |||||| |||| || ||| ||| || Sbjct 897992 GGAGAACGTGCACTCCGAGACGTATTC---GTTGCTCATTGACACCTATATCAAGGACCC 898048 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 ||||| | |||| || || ||||| | || || ||||||| |||||| Sbjct 898049 ACGGGAGCGGGAGTATTTGTTTGCTGCGATTGAGACTGTCCCGTGTATCAAGAGGAAGGC 898108 Query 42653 GGACTGGGCGCTCAACTGGAT------CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 ||||||||| ||| ||||| | | || |||| | || || | |||||| Sbjct 898109 GGACTGGGCTCTCCGGTGGATATCTGACAAAAG----GACG--TCCTTTGGGGTGAGGCT 898162 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 ||| || ||| | | ||| || || || |||||||| || |||| || || || || || Sbjct 898163 GGTGGCGTTTGCGGTCGTGGAAGGTATATTCTTCTCTGGGTCCTTTGCGTCGATATTTTG 898222 Query 42767 GCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 | | ||| || ||| | ||||| || | || |||||||||||||||||||| | Sbjct 898223 GTTGAAGAAG--CGTGGCCTTATGCCAGGCTTGACTTTCTCGAACGAACTCATCAGTCGA 898280 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 |||||||| |||| | |||||||| || || || ||| Sbjct 898281 GACGAGGGCATGCACACCGACTTTGCGTGTCTGCTTTTC 898319 >seq58 Length=3253204 Score = 158 bits (174), Expect = 2e-33 Identities = 469/714 (66%), Gaps = 31/714 (4%) Strand=Plus/Minus Query 243886 CTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGA 243945 ||| |||||| | ||||| | || || || || | | || || | |||||| Sbjct 1340279 CTGACTCTGGCAAATGAAGGCACCACGGTCGGCAGCGAGGTCGAGGACCTTCTTCTGGCT 1340220 Query 243946 TATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTG 244005 ||||| | | ||||||||||| | ||||| || ||||||| || | |||| |||| Sbjct 1340219 GATCTCCCAGACTGTCTTGTAGATCGCCTTGACGTCGTCGGGGATGCCGTAGATGCTCTG 1340160 Query 244006 CACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCA------CAGGCC 244059 | || || |||| | |||||| | | | ||| | || | ||| |||| | Sbjct 1340159 GATAGACCCGTTGTTGGCGATGATCATGTTCTTCATCTGGTCATCCCAGAGCTTCAGGTC 1340100 Query 244060 CAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCAC 244119 | | |||| ||| | ||| | || || ||||| ||||| || | || || Sbjct 1340099 GACGAGCTC--GCGAAGCAGCCAAGGGCAG----ACAACCTGGAACTCGCCGGCGAGAAC 1340046 Query 244120 GCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTG 244179 ||| || ||||| ||||||| || ||||||| | || |||| || || ||||| Sbjct 1340045 GCGACGGGTGTAGATGTTGCTGGTGTAAGGCTCGAAACATTCGTTGTTACCGAGGATCTG 1339986 Query 244180 CGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC-GTGC-CTC 244237 ||| || || |||||||| | | || || |||||| | || |||| | | Sbjct 1339985 GCTCGTAGAGGCGGTAGGCATGGGAGCAAGGAGAAGGGAGTTCCTGAGACCAGTGCGCGC 1339926 Query 244238 TGGATGCGGAGTC--TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGA 244295 | | || ||||| | ||||||||| | | | || ||| ||| | Sbjct 1339925 CACCTTC----TCCTTGAGCGAGGCCCAGTCCCAGAGGTCGGA-AGGA------GTTACA 1339877 Query 244296 GGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGT 244355 ||||||| ||| |||| ||| | |||||||| | ||||| |||||||| ||| || Sbjct 1339876 --CCCCACAAGTCGTACTGAAGCTGACCCTTGCTTGCAGGGCTTCCCTCGTACGTCTCGT 1339819 Query 244356 AGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCT 244415 |||| || ||| || |||| | | || | || | ||| |||| ||||||||||| Sbjct 1339818 AGGGCCCATCGATCTCAGCCATGTCGCTACTGGCCTCAACGGCTGCGTGGTAGATGGTCT 1339759 Query 244416 CGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGGGATGCCCATCATC 244474 |||||||| || ||| | | |||| || | | || || |||||| |||| || | Sbjct 1339758 CGAAGATCTGCTGGTTAAGGACGCGTGCTTCAGGCG-AGTCGAAGGGCATGCGCAGAGCC 1339700 Query 244475 ATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 ||||| | || || || || ||||| |||| |||||||| | ||| ||| |||| ||| Sbjct 1339699 ATGAAAGCATCCGCGAGACCTTGCACACCGACACCGATGGGGCGGTGACGCATGTTCGAG 1339640 Query 244535 CGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTG 244588 || ||||| || | |||||| ||||| ||||||| | |||||||||| Sbjct 1339639 CGACGTGCTTCAGGGATGGGGTAGTAGTTGACGTCGATGATGCGGTTGAGGTTG 1339586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335458055920