Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq215 86.0 6e-12 seq296 84.2 2e-11 >seq215 Length=105717 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 20522 TCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCC 20581 ||| | ||| ||| ||||| || |||||||| || || || ||||||||||| || ||| Sbjct 68936 TCCTCATACTTCGCACCAAAATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCC 68877 Query 20582 TCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCAT 20641 || | ||| || || || ||| | ||| |||||||| ||||||||| ||||| Sbjct 68876 TCTCGTCTATGACTCAACCCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAG 68817 Query 20642 ATCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGC 20701 ||||| || || | || || | | ||||| || | || | | |||||| || Sbjct 68816 ATCTTCACGCCCTTGGCAGATAGAAGCTTAGAGTCCGTTGTACCTCTGACAAACCATAGG 68757 Query 20702 AGCTCTT 20708 ||||||| Sbjct 68756 AGCTCTT 68750 >seq296 Length=2232338 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 20522 TCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCC 20581 ||| | ||| ||| ||||| || |||||||| || || || ||||||||||| || ||| Sbjct 1744320 TCCTCATACTTCGCACCAAAATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCC 1744379 Query 20582 TCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCAT 20641 || | ||| || || || ||| | ||| |||||||| ||||||||| ||||| Sbjct 1744380 TCTCGTCTATGACTCAACCCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAG 1744439 Query 20642 ATCTTGACTCC 20652 ||||| || || Sbjct 1744440 ATCTTCACGCC 1744450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441371051060280