Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq54 86.0 5e-12 seq165 82.4 6e-11 >seq54 Length=1324731 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| | || || || || |||||||| ||| |||||||||||||||||| || | Sbjct 967825 ACCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAG- 967767 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || || || | || || | |||||||| || || || || |||||||| || | Sbjct 967766 AAAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAG 967707 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCG 34077 | | || ||| |||||| || ||| ||| | || ||| | |||| ||| ||| Sbjct 967706 GGATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGG-CCTCGATGGAGTCAGAAGACTCG 967648 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| ||| || || |||||||| | || || || ||||| ||||| Sbjct 967647 ACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 >seq165 Length=362420 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/229 (70%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | || |||| |||||| || || || ||||||||||||||||||||| | Sbjct 207234 CCTCCACGGAGACGCA-CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATC-GGA 207177 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || || | || || | || ||||||||||| ||||||||||| || ||| || Sbjct 207176 AAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGG 207117 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078 | || ||| |||||| || || ||| | || ||| | ||| || | || || Sbjct 207116 GATGC-CTCCTTGTCCTGGATCTTGCCCTTCACGG-CCTCGATACTGTCGGAGGACTCAA 207059 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | | ||| || || ||||| || || || |||||||| ||||| Sbjct 207058 CTTC-AAGGGTATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 33922 AGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCGTCCAAT 33981 ||||||||||| |||||||| ||||||||||| | || || | || |||| Sbjct 207441 AGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGC 207382 Query 33982 TGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCCATAATT 34041 |||||||| || || |||| |||||| ||||| || | | ||| |||||| || Sbjct 207381 TGCTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATC 207322 Query 34042 TTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCGTTATTGTTTTTCC 34100 || || | | ||| | ||| |||| ||| ||| |||| || ||||| ||||| Sbjct 207321 TTGCCTTTGACAG-CCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCC 207263 Query 34101 GGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || || ||||| || |||||||| Sbjct 207262 CGTAAGCGTCTTCACGAATATTTGCAT 207236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060865974234