Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq165 114 3e-20 seq54 114 3e-20 >seq165 Length=362420 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||||||||||| || || ||||| ||||| | || || || |||||| Sbjct 206691 TCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCGGCGAAG 206632 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||||||||| ||||| || || ||||| || || || | ||||| Sbjct 206631 ATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTCACCGCC 206572 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || ||| ||| || || || || || ||||| ||||| ||||| ||||||||||| Sbjct 206571 TCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTCTTGACA 206512 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 206511 AAGATCTGCAT 206501 Score = 113 bits (124), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||| ||||| |||| || || || ||||| ||||| | Sbjct 207013 CATG-CCTCCACGAAGACGAAGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAAT 206955 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| || || ||||| || | ||||| || |||||||| |||||||||||| Sbjct 206954 CGGAGAGAGTACGACCGTCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGG 206895 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || || || || || | || || || ||| ||| || | Sbjct 206894 GAGGGATGCCCTCCTTGTCTTGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACT 206835 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| || ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 206834 CGACTTCAAGGGTGATGGTCTTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || |||| || || ||||| ||||| | ||||| || || ||| Sbjct 207199 TCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCAAAG 207140 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| |||||||| ||||| ||| ||| |||||||| || | |||||| Sbjct 207139 ATCAGGCGCTGTTGGTCCGGAGGGATGCCTCCTTG-TCCTGGATCTTGCCCTTCACGGCC 207081 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || ||| ||| || || ||||| || || || ||||| ||||| ||||||||||| Sbjct 207080 TCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTGCCGGTGAGAGTCTTGACA 207022 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 207021 AAGATCTGCAT 207011 >seq54 Length=1324731 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| | || || || || || | || || || |||||| Sbjct 967504 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAAG 967445 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||||| || || ||||||||||| || | || ||| Sbjct 967444 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTGACGGCC 967385 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || ||||| || || || || || |||||||||||||| ||||||| |||||||||| Sbjct 967384 TCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTCTTGACG 967325 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 967324 AAGATCTGCAT 967314 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || ||||||| ||| || || || || || ||||| | Sbjct 967824 CCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 967765 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||| |||||||| || ||| Sbjct 967764 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 967705 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | |||||| || || || || || || || Sbjct 967704 ATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACC 967645 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 967644 TCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | ||| || || |||| || || || ||||| || || || Sbjct 968055 TGACCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCA 967996 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| || || || | || || || |||||||||| ||||| || Sbjct 967995 GAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGA 967936 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || || | || ||| || || || ||| || || Sbjct 967935 GGGATGCCCTCCTTGTCCTGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCG 967876 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| ||||||| ||||||||||| |||||||| Sbjct 967875 ACCTCAAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649608759926