Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 165 1e-35 seq58 96.9 4e-15 >seq1 Length=1832336 Score = 165 bits (182), Expect = 1e-35 Identities = 547/831 (66%), Gaps = 30/831 (4%) Strand=Plus/Plus Query 125748 CCAGC-TTGCCGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTG 125806 ||||| ||| ||||||| ||| ||||||||||||||||| ||||| || | | | Sbjct 895662 CCAGCCTTGGAGTAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAG 895721 Query 125807 ATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAAT--TGTTGGCACCCCAATCT 125864 || | ||||| ||||| || |||||| | ||||| | | | | ||| || | Sbjct 895722 ATCATATCCATGAAATCGAAGGGGTTCGTCGAGTTGTAGTGCCTCTCGTTACC--AAGCG 895779 Query 125865 GTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATAC 125924 || ||||| |||| |||| |||| ||||||| ||||| || | |||||| | Sbjct 895780 CGCACAGCAGACGGTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCATGC 895839 Query 125925 CGATGAG-GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCC 125983 ||||||| | || |||||||||||| | |||| ||| ||| || | ||||| || Sbjct 895840 CGATGAGAGAGACG-GGGAGCGCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCG 895898 Query 125984 CGCACGATGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCA--AAGTCTT-GAAGAGT 126040 | ||| | | | | ||| ||| | |||| | || |||||| Sbjct 895899 ACGATGATCTGGCGGACGACGTCGGGGTGAGGACG---GCGCCTGAGGTGGGAGAAGAGG 895955 Query 126041 TCCACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCAC 126100 |||||| || ||| | |||||||||||| |||||| || || |||||| Sbjct 895956 AGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTG 896015 Query 126101 AGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAG 126160 || || ||||| || || |||||||| | |||||| || | || || || |||||| Sbjct 896016 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAG 896075 Query 126161 AAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTG 126220 ||||| ||||| || ||||| || | ||||||||| || ||||| ||| || || Sbjct 896076 AAGATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGA---CGAGTTCTTG 896132 Query 126221 TC---AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATC 126277 || | ||| || ||||| | ||||| |||| ||| || |||| ||||| ||| Sbjct 896133 TCTGTGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATG 896192 Query 126278 GCTTCAAAGAGTTCCTTCTTTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTG 126335 || || ||||| | ||| ||| | || || |||||||| | || ||||| | Sbjct 896193 GCGTCGAAGAGGT-ATTC-GCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGG 896250 Query 126336 AATATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCT 126394 | ||||| ||| ||||| | | ||| || | ||| | ||||||| | ||||| Sbjct 896251 AGTATGTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGCGCC 896309 Query 126395 TCGCTTATCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATC 126453 ||| ||| ||||| | || | ||| | | || ||||| || || || || Sbjct 896310 TCGGCGGCCTGCACCTCGTTGG-AGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTC 896368 Query 126454 GGACCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGT 126513 ||| |||| || || || |||| | ||||| | | || || ||||| || | Sbjct 896369 GGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTT 896428 Query 126514 CTT---CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| |||||||| | ||||| ||||| || | |||||| || ||||| Sbjct 896429 CTTCTCCCAGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCA 896479 Score = 138 bits (152), Expect = 1e-27 Identities = 246/355 (69%), Gaps = 8/355 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||| || ||||||||| |||||||| || ||| Sbjct 898306 GCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCT 898247 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || || |||||||||||||| || |||| ||| || || |||||||| || Sbjct 898246 GGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAAGAATATA 898187 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA--- 126223 || ||||| ||| ||||| | || | | | ||||||| || | || ||||| Sbjct 898186 CCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGA---CGTCCTTTTGTCAGAT 898130 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | |||| | ||||| | |||||| ||| |||||||||||| |||| ||||| || Sbjct 898129 ATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGCAGCA 898070 Query 126284 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343 || | | || | || ||| || ||||| || | || ||||| ||||| || Sbjct 898069 AACAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGAATACGTC 898010 Query 126344 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 126397 ||| ||| || | | ||| || | ||| || |||||||| ||||||| ||| Sbjct 898009 TCGGAGTGCACGTTCTCCATCAT-GATCTGGAACCCGTAGAAACAGCGCGCCTCG 897956 >seq58 Length=3253204 Score = 96.9 bits (106), Expect = 4e-15 Identities = 162/227 (71%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 114583 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642 ||| || || |||||||| |||||| | || || ||||| |||||| || | || Sbjct 1339348 GTTGCAAGCGTCCTTGTACAGCATGAAGGGACCACCAGTCTCAATTTGGGCCTCCAAGAT 1339289 Query 114643 AGCCTTCCAGA-CATCGGCGGCTGGCACAGTG--GCGTTGGCTCGCCCCTCCTCCTCGTA 114699 ||| | ||||| | || | | || | ||| |||| || || ||||||| |||||| Sbjct 1339288 AGCGTACCAGAGCTTCTGAGCCTCA-ATAGTCTTGCGT--GCACGGCCCTCCTTCTCGTA 1339232 Query 114700 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTAT 114758 |||| |||||| | ||||| || |||||| | || ||| || || || |||| || Sbjct 1339231 CTTTTCGTAGAGTTCCTCAAATTCCTCACCCCAAACTTCATGA-AGACCAGGAGCCTCAT 1339173 Query 114759 CTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||||||||||| ||||| |||||| | ||| || ||||||||| Sbjct 1339172 TCGGGCAGAAGAGCGACCACTGACCATTCGACTCGACGCGCTTCATG 1339126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351232986360