Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq165 114 1e-20 seq54 114 1e-20 >seq165 Length=362420 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || |||| || || || || || ||||| ||||| | || || || |||| Sbjct 206995 AAGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTC 206936 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||| ||||| || | ||||| ||||| || |||||||| || || || || || Sbjct 206935 CTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTC 206876 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || ||| ||| ||| |||| | | || || || ||||| | || | ||| Sbjct 206875 TTGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGT 206816 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | || || ||||| || ||||| Sbjct 206815 CTTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || |||||||||||||| | || ||||||| | || Sbjct 206484 AGAACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGCCCATCC 206425 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||||| ||||| ||||| | ||||| |||||||||||||| ||||| Sbjct 206424 TCAAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAAT 206378 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || |||| || || || || || || || || || | | ||| || | ||||||||| Sbjct 206706 AGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGC 206647 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||||||||| | || || ||||| ||||||||||| || || || || ||||| || Sbjct 206646 TGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATC 206587 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| || |||| | ||||| | || || || | || | ||||||||| Sbjct 206586 TTGCCCTTCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCG 206527 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| || || || || ||||| Sbjct 206526 GTGAGAGTCTTGACAAAGATCTGCAT 206501 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| || || | || || || || |||||||||||||| | | ||| || | ||||| Sbjct 207218 CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTC 207159 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 ||||| ||||||||| | || || ||||| ||||| ||||| || || || || || || Sbjct 207158 GAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTG 207100 Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 || || ||| || |||| | | || || || ||||| | | || |||||| Sbjct 207099 GATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTC-AAGGGTATGGTCTT 207041 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| | ||| || || || || ||||| Sbjct 207040 GCCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| ||||||||| || || ||||||||||| | | ||||| | || || ||| Sbjct 207441 AGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGC 207382 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| || | || | ||||| || ||||||||||| || || || || || || Sbjct 207381 TGCTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATC 207322 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || || ||| |||| | | ||| | || || || | || | ||||| || Sbjct 207321 TTGCCTTTGACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCC 207262 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || || ||||| |||||||| Sbjct 207261 GTAAGCGTCTTCACGAATATTTGCAT 207236 >seq54 Length=1324731 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| ||||| || || || |||||||| || | | ||| || | || || ||| Sbjct 967519 AGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGC 967460 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||||||||| | ||||| ||||||||||||||||| || || || || || || || Sbjct 967459 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATC 967400 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| || |||| | | ||| | || || || | || | ||||||||| Sbjct 967399 TTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCG 967340 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| || ||||| || ||||| Sbjct 967339 GTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| || || || ||||| || | || ||| || |||| Sbjct 967297 AGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCC 967238 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| |||| || ||||||||||| |||||||| || || || || Sbjct 967237 TCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 967178 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || || || |||| | | ||| || || || || | ||| | |||| Sbjct 967177 TGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTC 967118 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| || || || || || ||||| Sbjct 967117 TTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || || ||||||||||| || | | || || | || Sbjct 967809 AGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCC 967750 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | ||||| ||||||||||||||||| || || || || || Sbjct 967749 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 967690 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| || |||| | | ||| | || || || | || | ||| Sbjct 967689 TGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTC 967630 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||||||| || || ||||| || ||||| Sbjct 967629 TTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || || || || || ||||||||||| | | ||||| | || Sbjct 968038 AAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATC 967979 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || | || | ||||||||||| ||||| || || || || || Sbjct 967978 CTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC 967919 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || |||| | | || | || || || | || | || Sbjct 967918 CTGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGT 967859 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||| || || ||||| || ||||| Sbjct 967858 CTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642820157480