Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 seq54 95.1 1e-14 seq257 89.7 5e-13 seq165 89.7 5e-13 seq124 89.7 5e-13 >seq1 Length=1832336 Score = 143 bits (158), Expect = 3e-29 Identities = 523/807 (65%), Gaps = 35/807 (4%) Strand=Plus/Minus Query 52038 GAGGAGGTTGATATGTCGAGGGACTATGACGACTTTGAGTCTAAATTAAACGATGACGAG 52097 |||||| | || | || | |||| | |||||| ||| || | ||||| ||||| Sbjct 896470 GAGGAGATGGACCTCTCCAAGGACCAGCACGACTGGGAGAAGAAGCTCAACGACAACGAG 896411 Query 52098 CGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATCGTGAACATT 52157 ||| | || ||| ||||| | || |||||||| ||| |||| | ||||| ||| Sbjct 896410 CGCCACTTCATCTCCCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAG 896351 Query 52158 AACCTCATCGAG---TACATGCAGCGGAACGTTCCGGAACTCGAGGCGCAATACTTTTAT 52214 |||||| ||||| | | | || || | || | || |||||||| | ||| || Sbjct 896350 AACCTCGTCGAGCGATTC-TCCAACG--AGGTGCAGGCCGCCGAGGCGCGTTGCTTCTAC 896294 Query 52215 AATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATTGAGCAG 52274 ||| || | | || ||| | | ||| | |||| ||| || ||||| || || Sbjct 896293 GGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGA-CAC 896235 Query 52275 CTG-ATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCACGTGCCGTG 52333 || || || || | ||||||| || | | || ||||| | | || || Sbjct 896234 CTACATCAAGGACCCCAAGCAGCGCGAATACCTCTTCGACGCCATCGAGACCATCCCCTG 896175 Query 52334 CGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCG-AGAGCGACACCGCCACGCTGG 52392 | | || ||||| | ||||| || |||||| ||| | | | | | | | | Sbjct 896174 CATCAAGAAGAAGGCCGACTGGGCCCTGCGCTGGATCACAGA-CAAGAACTCGTCCTTCG 896116 Query 52393 CCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCG 52452 ||||||| | || ||||||||| |||||||| | || || |||||| ||| ||| Sbjct 896115 CCGAGCGTCTCGTCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCT 896056 Query 52453 CCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGA 52512 | ||||| | | || | | ||| | ||||| || || || ||| ||||||| | | Sbjct 896055 CTATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCA 895996 Query 52513 TATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACA--------AGAC 52564 | || ||||| || ||||||| |||||||| |||||| || | || | Sbjct 895995 TCAGCCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTCCTCTTCTCCCACCTCAGGC 895936 Query 52565 GCG--CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTG 52622 || | | ||| | | | || | || || ||| || ||||| || Sbjct 895935 GCCGTCCTCACCCCGACGTCG---TCCGCCA-------GATCATCGTC---GAGGCCGTC 895889 Query 52623 GCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCG 52682 || ||||| ||||||| | |||| |||||| || ||| || | |||||||||||| Sbjct 895888 GCCATCGAGCAGGAGTTCCTGACGGACGCGCTCCCCGTCTCTCTCATCGGCATGAACGCG 895829 Query 52683 CAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC-AGCTCGGGCA 52741 ||| |||||| ||||||||||||| || ||||| |||||| | |||| ||| || | Sbjct 895828 AAGTTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGTCTGCT-GTGCGCGCTTGGTAA 895770 Query 52742 GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGG 52801 | | ||| |||| | || || || || || ||| | | || ||||| |||| Sbjct 895769 CGAGAGGCACTACAACTCGACGAACCCCTTCGATTTCATGGATATGATCTCGCTCCAGGG 895710 Query 52802 CAAGACCAACTTTTTCGAGAAGCGAGT 52828 |||||||||||| ||||||||||| || Sbjct 895709 CAAGACCAACTTCTTCGAGAAGCGTGT 895683 >seq54 Length=1324731 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | |||||||| |||||||||||||| Sbjct 967824 CCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 967765 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||||| || || || | |||| |||||||| ||||| ||||| Sbjct 967764 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 967705 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| ||| || | || | || ||| | ||||| ||| Sbjct 967704 ATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACC 967645 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| | || || || |||| || || || || |||||||| Sbjct 967644 TCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || || ||||||||| | || || ||||||||| || || |||| Sbjct 967279 GATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCG 967220 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||| ||||||||||| ||||| || ||||| ||| | || ||| | Sbjct 967219 AAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTC-CTGAATCTTGCCTTTGAC 967161 Query 138541 TG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || ||| | ||||| ||||||| || | || || ||||||| || || Sbjct 967160 GGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTT 967101 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 967100 GACAAAGATCTGCAT 967086 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || ||||| |||||||| || || |||| Sbjct 967507 GACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCGGCG 967448 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| || || || || || ||| || || | Sbjct 967447 AAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTGACG 967388 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || | | ||| | ||||| ||||| | ||| | ||| || || |||| ||| || Sbjct 967387 GCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTCTTG 967328 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 967327 ACGAAGATCTGCAT 967314 >seq257 Length=1005854 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | |||||||| || ||||||||||||||| Sbjct 387524 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 387465 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || || |||| |||| |||||||| ||||||||||| Sbjct 387464 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGG 387405 Query 138508 ATAC 138511 |||| Sbjct 387404 ATAC 387401 >seq165 Length=362420 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| ||| | ||||| || ||||| ||||| |||| | Sbjct 207202 GACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCA 207143 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||||||||| || || || ||||| ||| || || | Sbjct 207142 AAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTGGATCTTGCCCTTCACG 207084 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || | |||||| ||||| || || | || | || || || || ||||| || Sbjct 207083 GCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTGCCGGTGAGAGTCTTG 207025 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||| ||||||||| || Sbjct 207024 ACAAAGATCTGCATGCCT 207007 >seq124 Length=638099 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||||||| ||||| |||||||| || || || | | Sbjct 263076 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCATCCTCGAGCTGCTTTCCAGCA 263135 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTAT 138509 |||| ||||| |||||||||||||| || Sbjct 263136 AAGATGAGACGTTGTTGGTCCGGAGGAAT 263164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260433560240