Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq58 125 7e-24 seq54 122 8e-23 seq165 100 3e-16 >seq58 Length=3253204 Score = 125 bits (138), Expect = 7e-24 Identities = 309/462 (67%), Gaps = 10/462 (2%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||||||||||||||| | ||||||||||| || | || |||| ||||||||||| || Sbjct 1340420 GTCGACGGTGAACTGGATAGCTTGAGCGGCTGGCCTCGTACGCAAGTAGTACATGCCCGT 1340361 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGGT 145836 ||| | |||| ||| ||| ||||| ||||||| | ||||| | || ||| Sbjct 1340360 CTTCAAGCCCTTCTTCCATCCGTAGAAGTGCATGCTCGTGAGTTGACCAAC-ACTGGGGG 1340302 Query 145837 TCGGCGACAAACAAATTTAGAGAT-TGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGC 145895 | || | | || || | || ||||| |||||| | | | |||||||| || Sbjct 1340301 ACTGCAAGTGG--ACGTTCAAGCTCTGACTCTGGCAAATGAAGGCACCACGGTCGGCAGC 1340244 Query 145896 CATGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGTG 145955 | ||| | | ||| | || ||||| | || || ||| ||||||||| Sbjct 1340243 GAGGTCGAGGACCTTCTTCTGGCTGATCTCCCAGACTGTCTTGTAGATCGCCTTGACGTC 1340184 Query 145956 CTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCAA 146015 | ||| || ||| ||| |||| | |||||| || | ||| | || |||| || Sbjct 1340183 GTCGGGGATGCCGTAGATGCTCTGGATAGACCCGTTGTTGGCGATGATCATGTTCTTCA- 1340125 Query 146016 TTCTGG--AGTGTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACC 146073 ||||| | | | |||| ||| ||||| | | || | || ||| ||| Sbjct 1340124 -TCTGGTCATCCCAGAGCTTCAGGTCGACGAGCTCGCGAAGCAGCCAAGGGCAGACAACC 1340066 Query 146074 TGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGAC 146133 || |||||||||||||||||||| | || | |||||||||| | |||||||| | Sbjct 1340065 TGGAACTCGCCGGCGAGAACGCGACGGGTGTAGATGTTGCTGGTGTAAGGCTCGAAACAT 1340006 Query 146134 TCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATG 146175 |||||||||||||| ||||| ||| | |||||||||||| Sbjct 1340005 TCGTTGTTACCGAGGATCTGGCTCGTAGAGGCGGTAGGCATG 1339964 >seq54 Length=1324731 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || |||||||| | |||||| ||| || ||||| || ||| Sbjct 968022 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCA 967963 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| || ||||| ||||||||||||||| || || |||| Sbjct 967962 GCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTACCCTTG 967903 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | |||| || ||| | | |||||| || | || | ||| |||||||||| || Sbjct 967902 ACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAGGTC 967843 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 967842 TTGACGAAGATCTGCAT 967826 Score = 109 bits (120), Expect = 5e-19 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | || ||||| || || || ||||| ||| || || ||| ||| || Sbjct 967523 ACCAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTC 967464 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| |||| | |||||||| |||||||| ||||||||||| ||| Sbjct 967463 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTG 967404 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || ||||| |||| | ||| | | |||||| || | || | ||| || Sbjct 967403 GATCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTT 967344 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| ||| || || || |||||||| Sbjct 967343 GCCGGTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | || || ||| || ||||| || ||| Sbjct 967794 GTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCGAGCTGCTTGCCA 967735 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| |||||||| ||||||||||||||| ||| || ||| Sbjct 967734 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTCCCTTC 967675 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | |||| || ||| | | |||||| |||| || | || || ||||||| || Sbjct 967674 ACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTC 967615 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 967614 TTGACGAAGATCTGCAT 967598 >seq165 Length=362420 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||| | ||| || || || || || |||||||| | |||||| ||| || ||||| Sbjct 207439 ATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGCTG 207380 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 || || ||| ||||||| ||||| ||||||||||| || |||||||||||| ||| || Sbjct 207379 CTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT 207320 Query 127030 CTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 |||| |||| |||| | | |||||| |||| ||| | || || || || Sbjct 207319 GCCTTTGACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGT 207260 Query 127090 CAGAGTTTTTACAAAAATCTGCATGGCT 127117 || || || || || || |||||| || Sbjct 207259 AAGCGTCTTCACGAATATTTGCATGCCT 207232 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || || |||||| | || ||| || || |||||||| ||| Sbjct 206979 GTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCCTCAAGCTGTTTGCCA 206920 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| ||||||||||| |||||||||||||| || || ||| Sbjct 206919 GCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTGAATCTTTCCCTTA 206860 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | |||| |||| | ||||||||| | ||| | || |||||||| || || Sbjct 206859 ACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTCTTGCCGGTGAGCGTC 206800 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 206799 TTAACGAAGATCTGCAT 206783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498915828080