Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 >seq1 Length=1832336 Score = 170 bits (188), Expect = 2e-37 Identities = 550/829 (66%), Gaps = 26/829 (3%) Strand=Plus/Plus Query 127221 CCAGC-TTGCCGTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTG 127279 ||||| ||| ||||||| || ||||||||||||||||| ||||| || | ||| | Sbjct 895662 CCAGCCTTGGAGTAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAG 895721 Query 127280 ATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAAT--TGTTGGCACCCCAATCT 127337 || | ||||| ||||| || |||||| | ||||| | | | | ||| || | Sbjct 895722 ATCATATCCATGAAATCGAAGGGGTTCGTCGAGTTGTAGTGCCTCTCGTTACC--AAGCG 895779 Query 127338 GTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATAC 127397 || ||||| |||| |||| |||| ||||||| ||||| || | |||||| | Sbjct 895780 CGCACAGCAGACGGTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCATGC 895839 Query 127398 CGATGAG-GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCC 127456 ||||||| | || |||||||||||| | |||| ||| ||| ||| | || || || Sbjct 895840 CGATGAGAGAGACG-GGGAGCGCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCG 895898 Query 127457 CGTACGAT--GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGT 127513 | ||| |||| || | ||| ||| | || | | || |||||| Sbjct 895899 ACGATGATCTGGCG-GACGAC-GTCGGGGTGAGGACGGC-GCCTGAGGTGGGAGAAGAGG 895955 Query 127514 TCCACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCAC 127573 ||||| || ||| | |||||||||||| |||||| || || |||||| Sbjct 895956 AGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTG 896015 Query 127574 AGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAG 127633 ||||| ||||| || || |||||||| | |||||| || | || ||||| |||||| Sbjct 896016 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAG 896075 Query 127634 AAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTA 127693 ||||| ||||| || ||||| || | ||||||||||| ||||| || | |||| Sbjct 896076 AAGATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGA-CGAGTTCTTGTC 896134 Query 127694 T-CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 | | ||| || ||||| | ||||| |||| ||| || |||| ||||| ||| || Sbjct 896135 TGTGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 896194 Query 127753 TTCAAAGAGTTCCTTCTTTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAA 127810 || ||||| | ||| ||| | || || |||||||| | || ||||| || Sbjct 896195 GTCGAAGAGGT-ATTC-GCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAG 896252 Query 127811 TATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 127869 ||||| ||| ||||| | | ||| || | ||| | ||||||| | ||||| || Sbjct 896253 TATGTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGCGCCTC 896311 Query 127870 GCTTATCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGG 127928 | ||| ||||| | || | ||| | | || ||||| || || || |||| Sbjct 896312 GGCGGCCTGCACCTCGTTGG-AGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGG 896370 Query 127929 ACCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCT 127988 | |||| || || || |||| | ||||| | | || || ||||| || ||| Sbjct 896371 AGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCT 896430 Query 127989 T---CCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | |||||||| | ||||| ||||| || | |||||| || ||||| Sbjct 896431 TCTCCCAGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCA 896479 Score = 127 bits (140), Expect = 3e-24 Identities = 243/353 (69%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| || ||||||||| |||||||| || ||| Sbjct 898306 GCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCT 898247 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || |||||||||||||| || |||| ||| || ||||||||||| || Sbjct 898246 GGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAAGAATATA 898187 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698 || ||||| ||| ||||| | || | | | ||||||| || ||||| | | Sbjct 898186 CCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGA-CGTCCTTTTGTCAGATAT 898128 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 |||| | ||||| | ||||| ||| |||||| ||||| |||| ||||| |||| Sbjct 898127 CCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGCAGCAAA 898068 Query 127759 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818 | | || | || ||| || ||||| || | || ||||| ||||| || || Sbjct 898067 CAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGAATACGTCTC 898008 Query 127819 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 127870 | ||| || | | ||| || | ||| || |||||||| ||||||| ||| Sbjct 898007 GGAGTGCACGTTCTCCATCAT-GATCTGGAACCCGTAGAAACAGCGCGCCTCG 897956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504768977720