Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 199 6e-46 >seq1 Length=1832336 Score = 199 bits (220), Expect = 6e-46 Identities = 558/851 (66%), Gaps = 13/851 (2%) Strand=Plus/Plus Query 159634 GTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCAT 159693 ||| | ||| ||| ||||||||| |||||||||||||||| | || || ||||| Sbjct 895673 GTAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATATCCAT 895732 Query 159694 GAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCT 159753 ||| |||| |||||| || || ||| || || || || || ||||| | Sbjct 895733 GAAATCGAAGGGGTTCGTCGAGTTGTAGTGCCTCTCGTTACCAAGCGCGCACAGCAGACG 895792 Query 159754 GTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAAC 159813 ||| || || || |||||||| |||||| || ||| || || | || || Sbjct 895793 GTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCATGCCGATGAGAGAGAC 895852 Query 159814 GGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGA 159873 ||||||||| |||| ||| ||||||| ||| || |||| || ||| | ||||| Sbjct 895853 GGGGAGCGCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATCTGGCG 895912 Query 159874 GAC-ACGTTCG---TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAA 159929 ||| |||| | | |||| ||| || ||| || |||||||| |||| Sbjct 895913 GACGACGTCGGGGTGAGGACGGC--GCC-----TGAGGTGGGAGAAGAGGAGGCAGGCAA 895965 Query 159930 AGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCA 159989 ||||| ||||| |||||||| || ||||| ||||||||| | | |||| || |||| Sbjct 895966 AGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCA 896025 Query 159990 TGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCT 160049 | | |||||| |||||||| || || | || || | ||| || ||||| |||| Sbjct 896026 TCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCT 896085 Query 160050 CCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACC 160109 | ||||| || || || ||||| | ||| | || || | ||| |||| | |||| | Sbjct 896086 CGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTCTGTGATCCAGC 896145 Query 160110 TTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATC 160169 |||||| || |||||||| |||||| || ||| ||||| ||||| || | Sbjct 896146 GCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGAGGT 896205 Query 160170 TGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGT 160229 || ||| ||| |||||||| || | || || ||||| | || | || Sbjct 896206 ATTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAGT 896265 Query 160230 GCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCT 160289 | | || || || ||||| || |||||| | |||||| |||||||| Sbjct 896266 GGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGCCTGCACCT 896325 Query 160290 CCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAG 160349 | | | ||| | | | || || | || || | ||||||| ||| || ||||| | Sbjct 896326 CGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGG 896385 Query 160350 CCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTC 160408 | | ||||| |||||||| || | ||||| | |||||| |||| ||||||| ||| | Sbjct 896386 CAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCCAGTCGTG-C 896444 Query 160409 ACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTAC 160468 ||| | || | || | ||| || || |||| || |||| || | |||||| Sbjct 896445 TGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCTTCTTGTAC 896504 Query 160469 ATGGCCCAGAT 160479 || |||||| Sbjct 896505 ATTTGCCAGAT 896515 Score = 132 bits (146), Expect = 8e-26 Identities = 359/544 (66%), Gaps = 13/544 (2%) Strand=Plus/Minus Query 159830 AGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA--CACGTTCGTACC 159887 ||||||||||| || ||||| || ||||| ||||| | || | || |||| | | | Sbjct 898399 AGAAACTCCTTTTCTATCTCCACTGCTTCTGTCACGAGCT-CAAGTATCACGCTAGGATG 898341 Query 159888 CCG--GCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 | |||| |||| | || || || || |||||||||||| ||||| || Sbjct 898340 TGGCCGCTTCTTCAAATGGCGG------AAAAGCAGACACGCAAAGTCGGTGTGCATGCC 898287 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| ||| ||||| ||||| || | | | ||| ||||| | |||||| || Sbjct 898286 CTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCTGGCATAAGGCCACGCTTCTT 898227 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 | |||||| || | |||||| | || || || || || |||||| |||||||||| Sbjct 898226 CAACCAAAATATCGACGCAAAGGACCCAGAGAAGAATATACCTTCCACGACCGCAAACGC 898167 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 ||| |||||| | ||||| || | | ||||| |||||| ||||| || || Sbjct 898166 CACCAGCCTCACCCCAAAGGACGTCCTTTTGTCAGATATCCACCGGAGAGCCCAGTCCGC 898107 Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCAC 160185 |||| | ||| ||||| | ||| | || |||||| ||| ||||| Sbjct 898106 CTTCCTCTTGATACACGGGACAGTCTCAATCGCAGCAAACAAATACTCCCGCTCCCGTGG 898047 Query 160186 ATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGC 160245 |||||||| || |||| ||| ||| ||| | || | |||||| || || || Sbjct 898046 GTCCTTGATATAGGTGTCAATGAGCAACGAATACGTCTCGGAGTGCACGTTCTCCATCAT 897987 Query 160246 CATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC-TGCACCTCCTGTGTGAACCTTT 160304 ||||| || ||||||| | ||||| | | || || || || | | ||||| | Sbjct 897986 GATCTGGAACCCGTAGAAACAGCGCGCCT-CGGCGACTTGGACGTCGTTGGAGAACCGCT 897928 Query 160305 GACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGA 160364 | || || | || || | ||||||| ||| || ||||| || | |||||| |||| Sbjct 897927 CGACGAGGTTTTCGTTCACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGCACGTGCGAGA 897868 Query 160365 TGAA 160368 |||| Sbjct 897867 TGAA 897864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152049197520