Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq54 131 2e-25 seq165 104 3e-17 >seq54 Length=1324731 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || |||||||||||||| ||||| Sbjct 968017 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAA 967958 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | || | || |||||||||| ||||| ||||| | Sbjct 967957 GATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTACCCTTGACGGC 967898 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | | |||| || || || || | |||||| || ||||| |||| || || || Sbjct 967897 CTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAGGTCTTGAC 967838 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 967837 GAAGATCTGCAT 967826 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| | || || | || |||||||||||||||||||| Sbjct 967505 CTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAA 967446 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||| ||| |||||| ||||| | Sbjct 967445 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTGACGGC 967386 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | | ||| || || || || | |||||| || ||||| |||| || || || Sbjct 967385 CTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTCTTGAC 967326 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 967325 GAAGATCTGCAT 967314 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||||||||| || || || |||| |||||||||||||||||||| Sbjct 967276 TCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCGAAA 967217 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| ||||| |||| | | Sbjct 967216 ATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGCCTTTGACGGCC 967157 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | | ||| || || || || | |||||||| || || |||| || || ||| Sbjct 967156 TCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACA 967097 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 967096 AAGATCTGCAT 967086 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || ||||| || | || |||||||||||||| ||||| Sbjct 967789 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 967730 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| |||||| ||| | | Sbjct 967729 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGC 967670 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | | ||| || || || || | |||||| || || || |||| || || || Sbjct 967669 CTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGAC 967610 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 967609 GAAGATCTGCAT 967598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| |||||||| || || ||||| |||| || |||||||| || Sbjct 966992 GTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCGTCCTCAAGCTGCTTTCCA 966933 Query 46457 GCGAATATCAAGCGCTGCTGGTC 46479 ||||| ||||| ||||||||||| Sbjct 966932 GCGAAGATCAAACGCTGCTGGTC 966910 >seq165 Length=362420 Score = 104 bits (114), Expect = 3e-17 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| || |||| ||||| | || || ||||||||||| ||||| Sbjct 207426 TCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGCTGCTTGCCCGCGAAG 207367 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT--CTTCTTGAGCG 46520 ||||||||||| || |||| || | | |||||||||| |||||| ||| ||| Sbjct 207366 ATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGCCTTTGACAGCC 207307 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 ||| || |||| || || || || | || || || || ||||| ||||| || | Sbjct 207306 TCGATAC--TGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGTAAGCGTCTTCA 207249 Query 46581 CAAAGATTTGCAT 46593 | || |||||||| Sbjct 207248 CGAATATTTGCAT 207236 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||| |||||||| || || || | || || ||||||||||||||||| Sbjct 206692 CTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCGGCGAA 206633 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| ||||||| || | || |||||| || ||||| ||| | || Sbjct 206632 GATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTCACCGC 206573 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | | || || || || || | ||||| || ||||| || || || || || Sbjct 206572 CTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTCTTGAC 206513 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 206512 AAAGATCTGCAT 206501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236160242840