Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq255 104 3e-17 >seq255 Length=1613832 Score = 104 bits (114), Expect = 3e-17 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 ||||| | || || || || |||| ||| | |||||| || ||| | || | || Sbjct 1414433 TTACCAATGGCATCGATTTCGTCGACGAAGATGATACAAGGCGCGTTCTT-CTTGGCCGT 1414375 Query 11734 T-CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || || |||||||| || |||||||| ||||||||||||||||| || Sbjct 1414374 GGCGAACAGGTCCCGTACACGGGACGACCCAACACCAACGAACATCTCAACGAA-TTCAG 1414316 Query 11793 GGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || | | || || | |||||| || || | ||| |||||| | ||| ||||| | || Sbjct 1414315 AGCCGGAGACGGAGAAGAAGGGGACGTTTGCCTCGCCAGCGGTTGCTTTGGCGAGCAAAG 1414256 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 ||||||| |||||||| | |||| ||| | ||| || || || ||||| || || Sbjct 1414255 TCTTACCAGTACCAGGAGGCCCAGAGAGGATGGCACCGCGAGGAATCTTTGCGCC 1414201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 168430 TTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA 168489 |||||||| || || || || || || | || | ||| | |||| |||||| |||||| Sbjct 616252 TTACCACGAAGCGGGAACACGCCGTAGTTGTCGCGACCGATGACGCTGAGACCTGCGACA 616193 Query 168490 GCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGCC 168549 ||||||| || || || ||||| || |||| |||||||||||| | | ||| || Sbjct 616192 GCGAGAGACTTGGCGGAGTCACCTTCGGTCAGGATGAGTGTACAGTCTGCAGCCTTCTTG 616133 Query 168550 GTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACC 168587 || || || ||||| || ||| | ||||||| ||| Sbjct 616132 GTGCCTGCGTTGTTGGCGTCGGAGAGCTTGGGGAGACC 616095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973666182600