Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=1832336 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| | ||||| || ||| || || || || |||||| || || Sbjct 895961 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACC 896020 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| || || |||||||| | ||| | |||| | ||| || |||||||||||||| Sbjct 896021 AGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGAT 896080 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGT-CAA 117451 |||||| || || || || | || |||||||||||||| |||| |||| | | Sbjct 896081 ACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGA-CGAGTTCTTGTCTGTGA 896139 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 117511 ||| || ||||| | |||||||||| || || || | || | |||||| || | Sbjct 896140 TCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGA 896199 Query 117512 A 117512 | Sbjct 896200 A 896200 Score = 95.1 bits (104), Expect = 1e-14 Identities = 171/246 (70%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||| ||||| || ||||| || ||||| | |||| Sbjct 898306 GCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCT 898247 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| || || ||||||||||||||| | || | |||| || ||||| |||||||| || Sbjct 898246 GGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCA-AAGGACCCAGAGAAGAATAT 898188 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-- 117450 ||| ||||| ||||||||| | || | | | | ||||| | | || ||||| Sbjct 898187 ACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGA---CGTCCTTTTGTCAGA 898131 Query 117451 -AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509 | ||| | ||||| | ||||||| ||| ||||| || ||||| | || || | Sbjct 898130 TATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGCAGC 898071 Query 117510 AAATAA 117515 ||| || Sbjct 898070 AAACAA 898065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978462201080