Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq54 158 3e-33 seq165 141 2e-28 seq124 96.9 8e-15 >seq54 Length=1324731 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| || ||||| || || || |||||||| | |||||| | ||||| || Sbjct 968035 AACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTC 967976 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| | || || ||||| ||||| ||||| || ||||| || Sbjct 967975 GAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 967916 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||| ||| |||| ||| ||| || || ||||| || | |||||| Sbjct 967915 AATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTT 967856 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 967855 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| |||||||| || ||||| ||||| || | |||||| | ||||| ||| Sbjct 967806 ACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCG 967747 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| ||||| || ||||| || Sbjct 967746 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 967687 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| ||| ||| |||| ||| ||| || || || || || | |||||| Sbjct 967686 ATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTT 967627 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 967626 CCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 140 bits (154), Expect = 7e-28 Identities = 158/209 (76%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCG 194991 |||| |||||||| ||||| || || || ||||| |||| |||| || | ||||| ||| Sbjct 967521 CAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAG-GTACGACCATCCTCG 967463 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| ||||| || || || || Sbjct 967462 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGG 967403 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||| ||| || | ||| ||| || || ||||| || | |||||| Sbjct 967402 ATCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTG 967343 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || ||||| | ||||| Sbjct 967342 CCGGTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| || || || || |||||||| |||| || || | || || ||| Sbjct 967294 ACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCG 967235 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| ||||| || || ||||| |||||||| || || ||||| ||| Sbjct 967234 AGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGA 967175 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| ||| |||| ||| || || || || || || | |||||| Sbjct 967174 ATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTT 967115 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | ||||| Sbjct 967114 CCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 >seq165 Length=362420 Score = 141 bits (156), Expect = 2e-28 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||||||||| || ||||| || || ||||| || |||| ||| || | |||||||| | Sbjct 206708 CAAGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAA 206649 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || ||||||||||| || |||||||| ||||| ||||| || || ||||||| Sbjct 206648 GCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAA 206589 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| || |||||| | || ||| || || |||||||| | ||||| | Sbjct 206588 TCTTGCCCTTCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGC 206529 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | ||| || || || | ||||| Sbjct 206528 CGGTGAGAGTCTTGACAAAGATCTGCAT 206501 Score = 131 bits (144), Expect = 4e-25 Identities = 156/209 (75%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || ||||| |||||||||| ||| || | ||||||||| Sbjct 207217 ACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCG 207158 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| || || |||||||| ||||| ||||| || ||||| || Sbjct 207157 AGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTGG 207099 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||| ||| || |||| || || ||||||||||| | ||||| Sbjct 207098 ATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTG 207040 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | ||||| Sbjct 207039 CCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || || || || ||||||| ||||| | || || || Sbjct 206991 ACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCCTCA 206932 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| || || ||||| || ||||| ||||| || ||||||||| Sbjct 206931 AGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTGA 206872 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| || ||| || |||| || || ||||||||||| | ||||| Sbjct 206871 ATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTCTTG 206812 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 206811 CCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 111 bits (122), Expect = 3e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | || ||||||||||||||||||||| || ||||| |||||||||| || || | Sbjct 206491 GAGACGCAGAACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCG 206432 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||| || || ||||| || |||||||| || || || ||||| || ||||||| Sbjct 206431 CCCATCCTCAAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGC 206376 >seq124 Length=638099 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| ||||| || ||||| ||||| ||| || || | ||||| |||||||| Sbjct 263066 GTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCATCCTCGAGCTG 263125 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||| || || ||||| || ||||||||||| |||||||||| Sbjct 263126 CTTTCCAGCAAAGATGAGACGTTGTTGGTCCGGAGGAATGC 263166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477093771139