Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq54 118 7e-22 seq165 107 1e-18 >seq54 Length=1324731 Score = 118 bits (130), Expect = 7e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| || || ||||| || ||| | || | || || ||||| || ||||| || Sbjct 967277 TTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCGAA 967218 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||||||||||| |||||| |||||||| Sbjct 967217 AATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGCCTTTGACGGC 967158 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || || ||| || |||||| |||| || ||||| ||||| || | ||||| || Sbjct 967157 CTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGAC 967098 Query 34970 AAAGATCTGCATA 34982 ||||||||||||| Sbjct 967097 AAAGATCTGCATA 967085 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| ||||| | || |||| || ||||| || || || || Sbjct 967788 TCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 967729 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || |||| Sbjct 967728 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCC 967669 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || || ||| | ||| || |||| || || || ||||| || | ||||| || Sbjct 967668 TCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACG 967609 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 967608 AAGATCTGCATA 967597 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || | | | || |||| || ||||| || ||||| || Sbjct 967504 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAAG 967445 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||| || ||||| ||||||| Sbjct 967444 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTGACGGCC 967385 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || || ||| | ||| || || | || || || || || || | |||||| || Sbjct 967384 TCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTCTTGACG 967325 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 967324 AAGATCTGCATA 967313 >seq165 Length=362420 Score = 107 bits (118), Expect = 1e-18 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || || |||||| | ||| |||| || |||||||| |||||||| Sbjct 207199 TCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCAAAG 207140 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | |||||||||| ||||| || |||| Sbjct 207139 ATCAGGCGCTGTTGGTCCGGAGGGA-TGCCTCCTTGTCCTGGATCTTGCCCTTCACGGCC 207081 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || || || |||||| || | || |||||| || || ||||||||||| ||| Sbjct 207080 TCGATACTGTCGGAGGACTCAACTTC-AAGGGTATGGTCTTGCCGGTGAGAGTCTTGACA 207022 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 207021 AAGATCTGCAT 207011 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || |||||||| |||||| | ||| |||| || ||||| || ||||| || Sbjct 206691 TCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCGGCGAAG 206632 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | |||||||| || |||||| || || | Sbjct 206631 ATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTCACCGCC 206572 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || ||| | ||| || || | ||| || || || || ||||||||||| ||| Sbjct 206571 TCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTCTTGACA 206512 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 206511 AAGATCTGCAT 206501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632345798376