Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=1832336 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 |||||||||| ||| || | ||| || || || || || || ||||| || || | || Sbjct 898288 CCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCTGGCATAAGGCCACGCTTC 898229 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||||| Sbjct 898228 TTCAACCAAAATATCGACGCAAAGGACCCAGAGAAGAATATACCTTCCACGACCGCAAAC 898169 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTAT-TATGA-ATCCATTTCAGTGCCCAAT 19159 || || || || | ||| || | | || || | | || ||||| || ||||| | Sbjct 898168 GCCACCAGCCTCACCCCA-AAGGA-CGTCCTTTTGTCAGATATCCACCGGAGAGCCCAGT 898111 Query 19160 CAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTC 19217 | |||||| | || | ||| || | ||||| || | | ||| | |||| ||||| Sbjct 898110 CCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGCAGCAAACAAATACTCCCGCTC 898053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106572643880