Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq313 89.7 4e-12 >seq313 Length=2003938 Score = 89.7 bits (98), Expect = 4e-12 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 550021 TAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAA 550080 ||| ||||| |||||||||||||| | || ||||| || ||||| || || ||||| Sbjct 1837169 TAGATGTGTCGGTGTTTGGCAAAACGACCGTGTCGAAATCATCGCCAACGACCAGGGTAA 1837110 Query 550081 CAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGC 550140 | |||| || || || ||||| || ||| |||| || || | ||| | |||||||| || Sbjct 1837109 CCGAACAACACCCTCGTATGTGTCCTTCTCGGACACCGAGCGTTTGATCGGTGATGCCGC 1837050 Query 550141 AAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGG 550200 || | || | | | || || |||| ||| | || || || || ||| | || || Sbjct 1837049 GAAGAACCAGGTCGCCATGAACCCCTCCAACACTGTCTTCGACGCCAAGCGTCTCATCGG 1836990 Query 550201 AAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCA 550242 | ||| || | ||| | || ||| | || |||||||| Sbjct 1836989 ACGAAAGTTCGAGGATGCTGAGGTCCAGTCCGACATGAAGCA 1836948 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||| || || || || || || || || |||| ||||| || |||||||| ||| || Sbjct 906990 TGTCCCTGCCTACTTCAACGATTCCCAGCGTCTGGCTACCAAGGATGCTGGTTCTATCGC 906931 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 |||||| | ||||| ||||| ||||| || || ||||||||||| |||| || || || Sbjct 906930 TGGACTCGAGGTTCTCCGTATCATCAACGAGCCCACTGCTGCTGCTATTGCCTACGGTCT 906871 Query 550531 TGA 550533 ||| Sbjct 906870 TGA 906868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029279235610330