Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 367 2e-96 >seq1 Length=1832336 Score = 367 bits (406), Expect = 2e-96 Identities = 589/841 (70%), Gaps = 14/841 (2%) Strand=Plus/Plus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||||||| || | ||||| |||||||| ||||| |||| | |||||| | ||||| Sbjct 895673 GTAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATATCCAT 895732 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTC-CAGCAGGT 47960 ||| ||||||||| | | ||| || || | || ||| | | |||||| Sbjct 895733 GAAATCGAAGGGGTTCGTCGAGTTGTAGTGCC-TCTCGTTACCAAGCGCGCACAGCAGAC 895791 Query 47961 GATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACA 48020 | ||||||||| |||||||||| | |||| | | ||||||||| ||||| || | Sbjct 895792 GGTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCATGCCGATGAGAGAGA 895851 Query 48021 CGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCT 48080 |||| | || | || || ||||||| ||| || ||||| || | | ||||| Sbjct 895852 CGGGGAGCGCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATCTG-- 895909 Query 48081 TAACGCGG--GAC-TCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 |||| ||| || | | | |||| | | | || |||| | |||||||| Sbjct 895910 ----GCGGACGACGTCGGGGTGAGGACGGCGCCTGAGGTGGGAGAAGAGGAGGCAGGCAA 895965 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||||| ||| ||||| |||||||||||| ||||||||||| ||||||||||| Sbjct 895966 AGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCA 896025 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 | | || | || ||||||||||| || | ||||| ||||| ||||||||||| |||| Sbjct 896026 TCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCT 896085 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || ||||| ||| ||| | ||| |||| || | ||||||||||| ||||||| Sbjct 896086 CGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTCTGTGATCCAGC 896145 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 || |||||||| ||||||||||||||||| || || ||||| ||||| |||||| | Sbjct 896146 GCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGAGGT 896205 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGT 48437 | || || | |||| | ||||| || || | ||| |||| |||| Sbjct 896206 ATTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAGT 896265 Query 48438 GCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTT 48497 | | ||||| || ||||||||| ||||||||| | ||||| ||||||| | Sbjct 896266 GGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGCCTGCACCT 896325 Query 48498 CTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGG 48557 | ||||||||| ||| | || ||||| ||||| || || || || ||||| ||||||| Sbjct 896326 CGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGG 896385 Query 48558 CAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTA 48614 ||||||| || | ||| ||||||||||||| | |||| || |||| | || Sbjct 896386 CAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCCAGTCGTGCT 896445 Query 48615 CGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACA 48674 ||| ||| ||||||| || || | ||||||||||| || || || ||||||| Sbjct 896446 GGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCTTCTTGTACA 896505 Query 48675 T 48675 | Sbjct 896506 T 896506 Score = 205 bits (226), Expect = 2e-47 Identities = 386/566 (68%), Gaps = 9/566 (2%) Strand=Plus/Minus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 |||| || |||||||| |||||| ||| ||||| || |||||||| |||| ||||| Sbjct 898315 AGCAGACACGCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAA 898256 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 | || ||||| | || | || || | ||| || || | ||| || || |||||| Sbjct 898255 GTCAAGCCTGGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAG 898196 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 ||||| || || ||||| |||| ||||| |||||| | || || || | | ||| Sbjct 898195 AAGAATATACCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGACGTCCTTTTG 898136 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 || || ||||| || |||||||| |||||| ||||||| || || | ||||| || Sbjct 898135 TCAGATATCCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATC 898076 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTT 48421 || || | | || | ||| | || |||| | |||||| | |||||| | Sbjct 898075 GCAGCAAACAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAAC--- 898019 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 | ||| |||| |||||||| ||||| || |||||||||||||||||| | ||| Sbjct 898018 GAATACGTCTCGGAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCC 897959 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541 || || || || || ||||||| | ||| | || || || || || || || || Sbjct 897958 TCGGCGACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTCG 897899 Query 48542 GAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GA 48598 || || || |||||||| || || || | ||| ||| ||| ||| |||| | Sbjct 897898 GAGGCGGCGAAGAAGGCGAGCACGTGCGAGATGAAGGTGCGTTCGGGGTGCGTGAGGCGG 897839 Query 48599 GCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCG 48658 | |||||| | || ||| | || ||||| | ||||| | ||||||||||| || Sbjct 897838 TCGTTCCAGTCGACTAGGTCGTGTCCGAGGTCTATCTCTTCGGCGGTCCAGAAGGAGGCC 897779 Query 48659 AGTGCTTTTTTGTACATGCCCCATAT 48684 |||| ||||||||||| ||| || Sbjct 897778 TCGGCTTGTTTGTACATGCGCCAGAT 897753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529108801280