Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 226 5e-54 seq58 107 4e-18 >seq1 Length=1832336 Score = 226 bits (250), Expect = 5e-54 Identities = 552/840 (66%), Gaps = 18/840 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| | |||||||||||||| | ||| |||||| || || ||||| || Sbjct 896518 GAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACAGCAGAGGAGATGGAC 896459 Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTC 25588 || |||||||| | ||| |||| | |||| | | | |||||| || || Sbjct 896458 CTCTCCAAGGACCAGCACGACTGGGAGAAGAAGCTCAA--CGACAACGAGCGCCACTTCA 896401 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || |||| | || ||||| || ||||| || ||||| || |||||||| || || Sbjct 896400 TCTCCCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAGAACCTCGTCG 896341 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || ||||| ||| || |||||| || ||||| || ||||||||||||||||| Sbjct 896340 AGCGATTCTCCAACGAGGTGCAGGCCGCCGAGGCGCGTTGCTTCTACGGTTTCCAGATCA 896281 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || || || | ||||| ||| || || || || || || ||||| | | Sbjct 896280 TGATGGAGAACATCCACTCCGAGACATACTCC---CTCCTCATCGACACCTACATCAAGG 896224 Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || | || | || || || | ||||||||| ||| ||| ||||||||| || Sbjct 896223 ACCCCAAGCAGCGCGAATACCTCTTCGACGCCATCGAGACCATCCCCTGCATCAAGAAGA 896164 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTG 25884 |||| |||||| || ||||||| ||| || || | | | || | |||||| || Sbjct 896163 AGGCCGACTGGGCCCTGCGCTGGATCA-CAGACAAGAACTCGTCCTTCGCCGAGCGTCTC 896105 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || ||||| || || || ||||| ||||| ||| ||| || || || | ||||||||| Sbjct 896104 GTCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGG 896045 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||| || || ||| |||||||||||||||||| | ||| Sbjct 896044 CTCAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCAGCCGTGAC 895985 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 ||||| | |||| || ||||||||||| |||| | | |||| | | | ||| Sbjct 895984 GAGGGCATGCACACCGACTTTGCCTGCCTCCTCTTCTC---CCACCTCAGGCGCCGTCCT 895928 Query 26065 TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124 | || |||| | |||||| ||||| || | |||||| ||||||| | Sbjct 895927 CACCCCGACGTCGTCCGCCAGATCATCGTCGAGGCCGTCGCCATCGAGCAGGAGTTCCTG 895868 Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184 | ||||||||| | | ||| |||| ||||| Sbjct 895867 ACGGACGCGCTCCCCGTCTCTCTCATCGGCATGAACGCGAAGTTGATGTGCCAGTACATC 895808 Query 26185 GAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244 |||| || || |||| |||||||||| ||| || || || | ||||| || | Sbjct 895807 GAGTTCGTCGCGGACCGTCTGCTGTGCGCGCTTGGTAACGAGAGGCACTACAACTCGACG 895748 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| ||||| || ||||| | || ||| | | || |||||||||||||| || ||| Sbjct 895747 AACCCCTTCGATTTCATGGATATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAG 895688 Score = 123 bits (136), Expect = 5e-23 Identities = 351/531 (66%), Gaps = 9/531 (2%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571 |||||||||||||||||| || || | | ||| | | || |||| ||| | || Sbjct 897788 CTGGACCGCCGAAGAGATAGACCTCGGACACGACCTAGTCGACTGGAACGACCGCCTCAC 897847 Query 25572 AGAC---GAGCAGCATTTTC-TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627 || || | ||| ||| || | ||||| | || ||||| || ||||| || || | Sbjct 897848 GCACCCCGAAC-GCACCTTCATCTCGCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCA 897906 Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687 | |||||||| || || |||| | ||| ||| || || || || ||||| | Sbjct 897907 TCGTGAACGAAAACCTCGTCGAGCGGTTCTCCAACGACGTCCAAGTCGCCGAGGCGCGCT 897966 Query 25688 GTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC 25747 |||||||||| |||||||| || || || |||||||| ||| |||| | ||| Sbjct 897967 GTTTCTACGGGTTCCAGATCATGATGGAGAACGTGCACTCCGAGACGTATTCGTTGCTCA 898026 Query 25748 TGATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACA 25807 | || || || | ||| ||| | || |||||| ||| || ||| Sbjct 898027 TTGACACCTATATCAAGGACCCACGGGAGCGGGAGTATTTGTTTGCTGCGATTGAGACTG 898086 Query 25808 TACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAG-CCAGAGCGCT 25866 | || | ||||||||||||||| ||||| | |||||| | | | | | || | Sbjct 898087 TCCCGTGTATCAAGAGGAAGGCGGACTGGGCTCTCCGGTGGAT-ATCTGACAAAAGGACG 898145 Query 25867 ACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCG 25926 | ||||| | | ||||||| || ||||| | ||||| || || || ||| || || Sbjct 898146 TCCTTTGGGGTGAGGCTGGTGGCGTTTGCGGTCGTGGAAGGTATATTCTTCTCTGGGTCC 898205 Query 25927 TTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAA 25985 |||||| | || || ||| | ||| || || ||| || |||| ||||| || || Sbjct 898206 TTTGCGTCGATATTTTGGTTGAAGAAGCGTGGCCTTATG-CCAGGCTTGACTTTCTCGAA 898264 Query 25986 CGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 ||| |||||||| | |||||||| | |||| || ||||| || ||||| Sbjct 898265 CGAACTCATCAGTCGAGACGAGGGCATGCACACCGACTTTGCGTGTCTGCT 898315 >seq58 Length=3253204 Score = 107 bits (118), Expect = 4e-18 Identities = 186/259 (72%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTG-CGT 221418 || || || ||||||| ||||||||| || | | || ||| | ||| | ||| | | Sbjct 1339840 GGGCTTCCCTCGTACGTCTCGTAGGGCCCATCGATCTCAGCCATGTCGCTA--CTGGCCT 1339783 Query 221419 CAG-GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGT-CTCTTGGCCTCGGGA 221476 || ||| ||||||||||||||||| |||||| || ||| || | | || | || || Sbjct 1339782 CAACGGCTGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTAAGGACGCGTG-CTTCAGGC 1339724 Query 221477 GAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || ||||||||| ||||| | |||||| | || || || || || || |||| ||| Sbjct 1339723 GAGTCGAAGGGCATGCGCAGAGCCATGAAAG-CATCCGCGAGACCTTGCACACCGACACC 1339665 Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GCTTCTGGCACGGGATAAAAGTTGACGT 221594 |||||| | ||| | | |||| || ||| | ||||| || | ||| || ||||||||| Sbjct 1339664 GATGGGGCGGTGACGCATGTTCGA-GCGACGTGCTTCAGGGATGGGGTAGTAGTTGACGT 1339606 Query 221595 CGATCAGATTGTTGAGGTT 221613 |||| | ||||||||| Sbjct 1339605 CGATGATGCGGTTGAGGTT 1339587 Score = 87.8 bits (96), Expect = 3e-12 Identities = 213/317 (67%), Gaps = 8/317 (3%) Strand=Plus/Minus Query 222310 GCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 ||| ||||| ||||| || || | ||||||||| ||| |||| | |||||| ||||| Sbjct 1338751 GCCAATACCTCCGGCAGTCTTACT-GATCATGGCACAGTTCTTCAAAGTGTCATAGATGC 1338693 Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGG 222428 |||| || ||||| ||||| | | | || ||||| || | |||| | | || Sbjct 1338692 CCTCTATGGAGTCGTCCTTCATGCATACCAAGAAACACGAGCTGAGTTGAGGATGAGGGG 1338633 Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGT 222488 | |||||| || || || || || || || ||||| | | ||||| |||| || Sbjct 1338632 TGCCGGCGTTGAAGAGGGTAGGTGACGCATGAGTGAAGTAACGCTCGGACATGAGATTGT 1338573 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 | ||||| | | | | | | |||| || | ||| || || ||| | |||| || Sbjct 1338572 AGGTCTCAATGGCACGGTCAATGTCGTTCTTGTGGATACCGATAGCGACACGCATGAGCA 1338513 Query 222549 TGTACTGGGGCCTCTCCACAG---GACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCA 222605 ||| ||| ||||||||| | | |||| ||| | || ||| ||||| || || | Sbjct 1338512 TGTGCTGTGGCCTCTCCGCTGTTCGACCATTG-ATCTTGAGG--AGGTATGAGCGCTCGA 1338456 Query 222606 GAGTCTTGAACCCAAAG 222622 |||||||||| || ||| Sbjct 1338455 GAGTCTTGAATCCGAAG 1338439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841119452480