Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 seq255 82.4 9e-11 >seq1 Length=1832336 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || || |||||| | || | || || || |||||||||| | ||||| || ||| Sbjct 896200 TTCGACGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGCTGG 896141 Query 65050 TTTG-ACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108 | | |||| |||| |||||||||||||| || | || || || || ||||| Sbjct 896140 ATCACAGACAAGAACTCG-TCCTTCGCCGAGCGTCTCGTCGCCTTCGCCGCCGTCGAGGG 896082 Query 65109 TATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCC 65168 ||||||||||||||| || ||| | |||| | ||| | |||||||| || || ||||| Sbjct 896081 TATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGCCTGATGCC 896022 Query 65169 AGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || |||||| || || || || ||| || ||||| | ||| || ||||| Sbjct 896021 TGGTCTCACCTTCTCCAACGAGCTCATCAGCCGTGACGAGGGCATGCACACCGACTTTGC 895962 Query 65229 C 65229 | Sbjct 895961 C 895961 Score = 95.1 bits (104), Expect = 1e-14 Identities = 171/246 (70%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 64987 TTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAA 65046 || |||| || || | ||||| || ||||| ||| ||||||| | ||||| | Sbjct 898065 TTGTTTGCTGCGATTGAGACTGTCCCGTGTATCAAGAGGAAGGCGGACTGGGCTCTCCGG 898124 Query 65047 TGGTT---TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTG 65103 ||| | ||||| || | | ||||| | | | | || | ||||||||| ||| Sbjct 898125 TGGATATCTGACAAAAGGACG---TCCTTTGGGGTGAGGCTGGTGGCGTTTGCGGTCGTG 898181 Query 65104 GAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCT 65162 || ||||| |||||||| ||||| || |||| | || | ||||||||||||||| || || Sbjct 898182 GAAGGTATATTCTTCTCTGGGTCCTT-TGCGTCGATATTTTGGTTGAAGAAGCGTGGCCT 898240 Query 65163 CATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGA 65222 ||||||||| | ||||| || ||||| || ||||| ||||| | ||| || Sbjct 898241 TATGCCAGGCTTGACTTTCTCGAACGAACTCATCAGTCGAGACGAGGGCATGCACACCGA 898300 Query 65223 GTTTGC 65228 ||||| Sbjct 898301 CTTTGC 898306 >seq255 Length=1613832 Score = 82.4 bits (90), Expect = 9e-11 Identities = 239/358 (67%), Gaps = 10/358 (3%) Strand=Plus/Plus Query 14430 TGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACCATGGTGAAG 14489 || |||| || ||||| | | ||| | | || ||| | ||||| ||||| || || | Sbjct 617233 TGCAGGTCGCCCAACTAGTTGGCTATATTTCCGAAAAGGCAGCGTATCACCACGGCGA-G 617291 Query 14490 TATCCTTAGCGGAC-ACGATTGTTAAGTTGGCAAACGACTACACGGGTTCAAACAACATT 14548 | || | || || || || || ||||| | ||||||| || |||||||| Sbjct 617292 CAAAGTTTGATGATGACCATCGTCAACTTGGCGCAAGACTACATCGGCAGTAACAACATC 617351 Query 14549 AACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTC-TCATGGGTGGTAAGGATGCTTC 14607 ||| | || ||| ||||||||| ||||| ||| ||| ||| ||||| ||| | | Sbjct 617352 AACTTGCTCATGCCGAATGGTCAATTCGGTACTCGTGATCA-GGGCGGTAAAGATCATGC 617410 Query 14608 -TCAGACGAGGTACATTTTCACAAAACTTACCAAGGAGGCTCGCAAGATCTTTGATCCTC 14666 || | ||||||| || ||||| | | | | ||| || | | || ||||| Sbjct 617411 CTCTG-CGAGGTATATCTTCACCGAGCCGTCGTTGATGGCCCGTACACTGTTCCATCCTG 617469 Query 14667 GGGATGACCCGATCCTCAACTACTTGGACGATGATGGACGCTC--CATTGAACCAGACTT 14724 | || || || |||| ||||||||| | |||||| ||| | ||||||||| || | Sbjct 617470 GCGACGATCCTCTCCTTAACTACTTGAAGGATGAT--ACGTTGGACATTGAACCCGAGTG 617527 Query 14725 TTACATGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAGGGTATCGGTACGGGT 14782 || ||||| | || ||| | ||||| || || | |||||||||||||| ||| Sbjct 617528 GTATATGCCCGTCATTCCTATGATCCTCGTCAACGGTGCTGAGGGTATCGGTACTGGT 617585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567236092960