Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq187 107 6e-18 >seq187 Length=1225202 Score = 107 bits (118), Expect = 6e-18 Identities = 165/234 (71%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 251416 CACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTG 251475 ||| ||| || ||||| | || ||| |||||| || || | || || |||| | Sbjct 347195 CACATATCGCAAACATGCAAGCGGTAGGCATCACTAGCCTCGAACAGACGTTCCTTCAAG 347254 Query 251476 AAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCA 251535 || || ||||||| || ||||| |||||||| ||||| || ||||||||||||||| Sbjct 347255 AACGCAGCCACACCGTGCGAGATCATGCAATCACGTTCCATCTCTCCGAAACGAAGACCA 347314 Query 251536 CCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAG 251595 ||||| ||| | |||||| | ||||| | |||||| | || |||||| || Sbjct 347315 CCATCACGACTACGACCCTCCACCGGCTGTCTCGTGAGAATCTGCACAGGACCACGGGCA 347374 Query 251596 CGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG-CGGG 251648 || || ||| || | ||||| ||||||||||| |||||| ||| |||| Sbjct 347375 CGCGAGTGAATCTTGTCGTCCACCATGTGCTTGAGACGTTGGTAGTATGTCGGG 347428 Score = 96.9 bits (106), Expect = 1e-14 Identities = 112/148 (76%), Gaps = 6/148 (4%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| |||||||| |||||||| ||||| ||||||||||| || ||| | | || | Sbjct 347622 CGATCGTCATACGCGAAGGAATAGCGTGGGGGTTGATGATGATATCAGGTGTAATACCCT 347681 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTC 251959 | |||||||| ||||||||| |||| | || | | |||||||| ||||| || | Sbjct 347682 CTGCAGTGAAAGGCATATCC---TCCTGACGGTAGGTAATACCAATAGTACCCTTCTGAC 347738 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||| |||||| || || || Sbjct 347739 CGTGACGAGAAGCGAACTTGTCTCCGAT 347766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471811622120829