Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 192 7e-43 seq255 96.9 4e-14 seq296 93.3 5e-13 seq58 91.5 2e-12 >seq1 Length=1832336 Score = 192 bits (212), Expect = 7e-43 Identities = 236/316 (75%), Gaps = 6/316 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| ||| || || ||| |||||| |||||||||||||||| |||||||||| Sbjct 895665 GCCTTGGAGTAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATC 895724 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC- 868809 | ||||| | ||| ||||| | || ||||||||| | ||| || |||| ||| Sbjct 895725 ATATCCATGAAATCGAAGGGGTTCGTCGAGTTGTAGTGCCTCTCGTTACCAAGCG-CGCA 895783 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||||| ||||| ||||| |||||||||||||||||||| | |||||||||||||| Sbjct 895784 CAGCAGACGGTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCATGCCGAT 895843 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 ||| | || || |||| || ||| ||||| | |||||| |||||||||||||||| Sbjct 895844 GAGAGAGACGGGGAGCGCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCGACGAT 895903 Query 868930 GATCTGCCTGGGCACGTC-GGCCGAGGGCTTGTTGAC-GAGCATCGTGTAGAGCAGGCAG 868987 |||||| | | ||||| || |||| | | | | ||| | | |||| |||||| Sbjct 895904 GATCTGGCGGACGACGTCGGGGTGAGGAC--GGCGCCTGAGGTGGGAGAAGAGGAGGCAG 895961 Query 868988 GCAAAGTCGCAGTGCA 869003 ||||||||| ||||| Sbjct 895962 GCAAAGTCGGTGTGCA 895977 Score = 174 bits (192), Expect = 2e-37 Identities = 211/287 (74%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | | |||| || | || Sbjct 896262 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGCCTGC 896321 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||| || || | ||||||||| ||||| |||||| ||| ||||| Sbjct 896322 ACCTCGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGCGAAG 896381 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG---CGACACCCAGTGG 869809 || || |||||||| ||| ||||||||||||| |||| |||| | | |||||| | Sbjct 896382 AAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCCAGTCG 896441 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 ||| | |||||||| |||||| || ||||||| |||||||||||||| ||| Sbjct 896442 TGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAGGCCTCGGCCTTCTTG 896501 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916 ||||| | ||| | | ||||| |||||||||| || || ||||| Sbjct 896502 TACATTTGCCAGATCTCATGGTATTGGATAGGGAATAGAACGAAGCG 896548 Score = 167 bits (184), Expect = 3e-35 Identities = 213/290 (73%), Gaps = 15/290 (5%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||| | |||||| |||| ||| || ||||| ||||| |||||| Sbjct 895980 CCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTC 896039 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||| | | ||| ||| ||||| ||||| |||||||||||||| ||| Sbjct 896040 TTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAG 896099 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 ||| ||| |||||||| ||| | |||| | ||||| ||||||| || ||| Sbjct 896100 GCGACGAGACGCTCGGCGAAG--GACGAG----TTCTTGTCTGTGATCCAGCGCAGGGCC 896153 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC---C 869413 ||||||||||| ||| | | | || | || ||||||||| ||||||| || | Sbjct 896154 CAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGAGGTATTCGCGC 896213 Query 869414 TTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | | | |||||||||| ||||||||||| ||||| || || ||||| Sbjct 896214 TGCTTG---GGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTC 896260 Score = 134 bits (148), Expect = 2e-25 Identities = 178/245 (73%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| | |||||| || ||||||||| ||||| || | | |||| || |||||| Sbjct 898006 GAGTGCACGTTCTCCATCATGATCTGGAACCCGTAGAAACAGCGCGCCTCGGCGACTTGG 897947 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || |||||| || | ||||| ||| ||||||||||||| ||||||||| Sbjct 897946 ACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTCACGATGCCGTCGGAGGCGGCGAAG 897887 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || |||||| ||| ||| ||| ||| || ||| ||| ||||| | Sbjct 897886 AAGGCGAGCACGTGCGAGATGAAGGTGCGTTCGGGGTGCGTGAGGCGGTCGTTCCAGTCG 897827 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || |||| | |||||| | ||| ||||||||||||| ||||||||||| | |||| Sbjct 897826 ACTAGGTCGTGTCCGAGGTCTATCTCTTCGGCGGTCCAGAAGGAGGCCTCGGCTTGTTTG 897767 Query 869870 TACAT 869874 ||||| Sbjct 897766 TACAT 897762 Score = 120 bits (132), Expect = 4e-21 Identities = 131/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||||||| ||||||| ||| || ||||| ||||| |||| || ||||||| ||||| Sbjct 898664 GTACTCGGACACGCGCTTCTCAAAGAAGTTTGTCTTCCCCTGCAGGGAGATCATGTCCAT 898605 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||||||||| | | | ||||||||| ||| ||||| | | |||||||| Sbjct 898604 AAAGTCGAACGGGTTCGCGGCGTGGTAGTGCTTGTCGTTCCCGAGAGCCTGTAGCAGGCG 898545 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAG 868872 ||| || || ||||||||||| || | |||||| ||||||||||||| || || Sbjct 898544 GTCTGCTACGAACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCTATTAG 898491 >seq255 Length=1613832 Score = 96.9 bits (106), Expect = 4e-14 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GT 19110 |||||| || || ||||| |||||| | | || || | || || || ||||| || Sbjct 693709 CATCGGTGGGACTGTGACTTGCGTGATTAGAGGTGTACCCTCTGGGCTTGGAGAGCCAGT 693768 Query 19111 GCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGG 19170 | || |||||| ||||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct 693769 G-TTCGACAAGCTCGAGGCGAAACTCGCTCACGCCATGCTCTCGATCCCTGCCACCAAGG 693827 Query 19171 GATTCGAGATTGGCAGCGGGTT 19192 |||||||||||| ||| || Sbjct 693828 CTTTCGAGATTGGCTCCGGCTT 693849 >seq296 Length=2232338 Score = 93.3 bits (102), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 ||||||||| |||| || |||| |||||||||||||||||||| | || | ||||| Sbjct 390875 GCCTCGGTGGCGATACGCTCGAAGATGTCGTTGACAAACGAGTTAAGGATGGCCATCGCT 390816 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||||| || || ||||| ||||||||||| || Sbjct 390815 TTGTTGGAGATACCAGTATCAGGGTGGACCTGCTTGAGGAC 390775 >seq58 Length=3253204 Score = 91.5 bits (100), Expect = 2e-12 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1627870 TCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCC 1627929 || ||||| || ||||| ||||| || || || ||||| |||| ||||||| | || || Sbjct 1339690 TCCGCGAGACCTTGCACACCGACACCGATGGGGCGGTGACGCATGTTCGAGCGACGTGCT 1339631 Query 1627930 TCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCT 1627987 || || | ||||||| ||||| |||||| | ||||||||||||| | | || |||| Sbjct 1339630 TCAGGGATGGGGTAGTAGTTGACGTCGATGATGCGGTTGAGGTTGAACGCGACAACCT 1339573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107113185495489