Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 205 1e-46 seq296 102 1e-15 seq58 87.8 3e-11 >seq1 Length=1832336 Score = 205 bits (226), Expect = 1e-46 Identities = 245/329 (74%), Gaps = 9/329 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||| | |||||| ||| ||| || ||||| ||||| |||||| Sbjct 895980 CCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTC 896039 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | ||| ||| ||||| ||||| |||||||||||||| ||| Sbjct 896040 TTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAG 896099 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||||||| |||||||| || | | || | | | || ||||||| || ||||| Sbjct 896100 GCGACGAGACGCTCGGCGAA--GGACGAGTTCTTGTCTG-TGATCCAGCGCAGGGCCCAG 896156 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC---CTTC 794577 || ||||| ||| | | |||| | || ||||||||| ||||||| || || | Sbjct 896157 TCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGAGGTATTCGCGCTGC 896216 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 | | |||||||||| |||||||||||||||||| ||||| ||||| ||||||||||| Sbjct 896217 TTG---GGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTC 896273 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||||||| || || ||||| Sbjct 896274 TCCATCATGATCTGGAAACCGTAGAAGCA 896302 Score = 179 bits (198), Expect = 6e-39 Identities = 233/317 (74%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||||| || || || ||| |||||| |||||||||||||||| |||| Sbjct 895659 ACACCAGCCTTGGAGTAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGC 895718 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC 794012 ||||||| ||||| | ||| ||||| | || ||||||| ||||| || ||| Sbjct 895719 GAGATCATATCCATGAAATCGAAGGGGTTCGTCGAGTTGTAGTGCCTCTCGTTACCAAGC 895778 Query 794013 GACGCA-AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 | |||| ||||| ||||| |||||||| || |||||||||||||| | |||||||| Sbjct 895779 G-CGCACAGCAGACGGTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCAT 895837 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 ||||||||| | ||||| |||| || | | ||||| | |||||| |||||||||| Sbjct 895838 GCCGATGAGAGAGACGGGGAGCGCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTC 895897 Query 794132 GATGATGATCTGCCTGGGCACGTCG----GACGACGGCTTGTCGACGAGCATCGTGTAGA 794187 || ||||||||| | | |||||| || |||||| | | ||| | | ||| Sbjct 895898 GACGATGATCTGGCGGACGACGTCGGGGTGAGGACGGC--GCC--TGAGGTGGGAGAAGA 895953 Query 794188 GCAGGCAGGCAAAGTCG 794204 | ||||||||||||||| Sbjct 895954 GGAGGCAGGCAAAGTCG 895970 Score = 141 bits (156), Expect = 1e-27 Identities = 177/242 (73%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| | || ||||| || ||| || || | |||||||| ||||| ||| Sbjct 896307 GCCTCGGCGGCCTGCACCTCGTTGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCG 896366 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||| ||||| ||||| |||||||| ||| ||||| ||||||| |||| ||||| Sbjct 896367 TCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGC 896426 Query 796270 GAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 |||||| | | ||| | |||||| | |||||| || ||||| |||||| Sbjct 896427 TTCTTCTCCCAGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCAGAAGGAG 896486 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAG 796386 ||||||||||| |||||||| | ||| ||| ||||| |||| ||||| ||||| ||| Sbjct 896487 GCCTCGGCCTTCTTGTACATTTGCCAGATCTCATGGTATTGGATAGGGAATAGAACGAAG 896546 Query 796387 CG 796388 || Sbjct 896547 CG 896548 Score = 129 bits (142), Expect = 9e-24 Identities = 163/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||| | ||||||| |||||||| || || ||| || || | ||||| || | Sbjct 897970 AAACAGCGCGCCTCGGCGACTTGGACGTCGTTGGAGAACCGCTCGACGAGGTTTTCGTTC 897911 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 |||||||||||| ||||||||| |||||||| |||||| ||| ||| || ||| | Sbjct 897910 ACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGCACGTGCGAGATGAAGGTGCGTTCGGGG 897851 Query 796261 TCGCTGA-GCG--AGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 | ||| ||| | ||||| ||| |||| |||||||| | ||| ||||||||| Sbjct 897850 TGCGTGAGGCGGTCGTTCCAGTCGACTAGGTCGTGTCCGAGGTCTATCTCTTCGGCGGTC 897791 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359 || |||||||||||||| | ||||||||| ||| ||| || Sbjct 897790 CAGAAGGAGGCCTCGGCTTGTTTGTACATGCGCCAGATCTGT 897749 Score = 127 bits (140), Expect = 3e-23 Identities = 132/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 |||||| ||||||| ||| || ||||| ||||| |||| || ||||||| ||||| Sbjct 898663 TACTCGGACACGCGCTTCTCAAAGAAGTTTGTCTTCCCCTGCAGGGAGATCATGTCCATA 898604 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||||||||| || | |||||||||| ||| |||||| | | ||||||||| Sbjct 898603 AAGTCGAACGGGTTCGCGGCGTGGTAGTGCTTGTCGTTCCCGAGAGCCTGTAGCAGGCGG 898544 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAG 794080 || || ||||| || ||||| || | |||||| |||||||||||||| || || Sbjct 898543 TCTGCTACGAACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCTATTAG 898491 >seq296 Length=2232338 Score = 102 bits (112), Expect = 1e-15 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||||||| |||| || |||| |||||||||||||||||||| | ||| | ||||| | Sbjct 390875 GCCTCGGTGGCGATACGCTCGAAGATGTCGTTGACAAACGAGTTAAGGATGGCCATCGCT 390816 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| || || ||||| ||||||||||| || Sbjct 390815 TTGTTGGAGATACCAGTATCAGGGTGGACCTGCTTGAGGAC 390775 Score = 89.7 bits (98), Expect = 8e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 |||||| || | |||||| || ||||||| ||||||| |||| ||||| ||| | | ||| Sbjct 391066 CTTGGTCACCGACTTGGTGCCTTCTGAGATGGCGTGCTTGGCGAGTTCACCGGGGAGGAT 391007 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||||||||||| ||||||||||| || Sbjct 391006 GAGGCGCACGGCCGTCTGGATCTCTCG 390980 >seq58 Length=3253204 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2070133 AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGC 2070192 || || || || || || ||||| ||||| || || || ||||| |||| ||||||| | Sbjct 1339696 AAAGCATCCGCGAGACCTTGCACACCGACACCGATGGGGCGGTGACGCATGTTCGAGCGA 1339637 Query 2070193 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 || || || || | ||||||| ||||| |||||| | ||||||||||||| Sbjct 1339636 CGTGCTTCAGGGATGGGGTAGTAGTTGACGTCGATGATGCGGTTGAGGTTG 1339586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916212679264163