Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq54 131 1e-25 seq165 116 2e-21 >seq54 Length=1324731 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| |||| ||||||||||||||| ||||| || || | || |||| Sbjct 967809 AGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCC 967750 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || |||||||| | || | ||||||||||| Sbjct 967749 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 967690 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || |||| | || || ||| | |||||| || | || || ||| Sbjct 967689 TGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTC 967630 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||| || ||||||||||| Sbjct 967629 TTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || |||||||| || || ||||| || ||| | || | || Sbjct 967297 AGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCC 967238 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| || || || |||||||| | || | ||||||||||| Sbjct 967237 TCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 967178 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||||| | || || ||| || ||| || || | || |||||| Sbjct 967177 TGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTC 967118 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||| |||||||||||||| Sbjct 967117 TTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||| ||||| || || || || |||| |||| Sbjct 968037 AGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCC 967978 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | ||||||||||| Sbjct 967977 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 967918 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||||| | || || || | |||||| |||| || || ||| Sbjct 967917 TGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTC 967858 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||||||||| Sbjct 967857 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || | | | || |||| || || ||||| |||||||| Sbjct 967505 CTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAA 967446 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | |||||||| || | || || ||||||| Sbjct 967445 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTGACGGC 967386 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || || ||| | |||||| |||| || || ||||| || || | ||||| || Sbjct 967385 CTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTCTTGAC 967326 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 967325 GAAGATCTGCAT 967314 >seq165 Length=362420 Score = 116 bits (128), Expect = 2e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||| || |||||||| || ||| | || |||| || || Sbjct 206706 AGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGC 206647 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||||||||| || || || ||||| | || | |||||||| || | || Sbjct 206646 TGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATC 206587 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || || | | || ||| | |||||| |||| ||| || ||||| || Sbjct 206586 TTGCCCTTCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCG 206527 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||| ||||||||||||||| Sbjct 206526 GTGAGAGTCTTGACAAAGATCTGCATG 206500 Score = 105 bits (116), Expect = 4e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||||||| | || ||||||||||||||| || || || ||| | || |||| || Sbjct 207217 ACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCG 207158 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || ||||| |||||||| || || ||||| | || | |||||||||| | Sbjct 207157 AGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGA-TGCCTCCTTGTCCTGG 207099 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || |||| | || || || ||| || |||| || ||||||||| Sbjct 207098 ATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAA-GGGTATGGTCTTG 207040 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| ||||| ||||||||||||||| Sbjct 207039 CCGGTGAGAGTCTTGACAAAGATCTGCATG 207010 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| || ||||||| |||| |||| ||||| ||||| || |||||| Sbjct 207426 TCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGCTGCTTGCCCGCGAAG 207367 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || || || || | || | ||||||||||| | || || |||||| | Sbjct 207366 ATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGCCTTTGACAGCC 207307 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || ||| | |||||| || | ||| || ||||||||||| || ||||| || Sbjct 207306 TCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGTAAGCGTCTTCACG 207247 Query 34967 AAGATCTGCATG 34978 || || |||||| Sbjct 207246 AATATTTGCATG 207235 Score = 102 bits (112), Expect = 5e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||||| ||| ||||||||||||||| || || || ||| ||||| |||| Sbjct 206485 CAGAACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGCCCATC 206426 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || |||||||||||||||||||| || || |||||||| Sbjct 206425 CTCAAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTC 206387 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || ||||||||| |||||||| || || || | || | || Sbjct 206994 AGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCC 206935 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || |||||||| || || || || || | || | ||||||||||| Sbjct 206934 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCT 206875 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || || | | || || || |||||| |||| ||| |||||| Sbjct 206874 TGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTC 206815 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||||||||| Sbjct 206814 TTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691541706223