Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq165 107 1e-18 seq54 98.7 8e-16 >seq165 Length=362420 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||||||||| ||||| || || ||||| ||||||| | ||||| ||| || || || Sbjct 207439 ATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGCTG 207380 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||| || | ||||| | || ||||| || ||||||||||| ||||| || | || Sbjct 207379 CTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT 207320 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 |||||||| || | | |||||||| || || || || || || || || || || Sbjct 207319 GCCTTTGACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGT 207260 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | || || || ||||| ||||| Sbjct 207259 AAGCGTCTTCACGAATATTTGCAT 207236 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| ||||| | ||||| || || || || || ||||||||||| | Sbjct 207009 CCTCCACGAAGACGAAGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAG 206950 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| || || || ||||||||||| | || | | || ||||| || || Sbjct 206949 AGAGTACGACCGTCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGG 206890 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | ||| || |||| || | | |||| || || ||| Sbjct 206889 ATGCCCTCCTTGTCTTGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACT 206830 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || | || ||||| || |||||||| Sbjct 206829 TCAAGGGTGATGGTCTTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 >seq54 Length=1324731 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | ||||| || ||||| || || || || || || | Sbjct 967312 CCTCCACGAAGACGGAGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGGAG 967253 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || ||||| || ||||| || | || | | ||||| ||||| ||| Sbjct 967252 AGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGA 967193 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || |||||| | || | | |||||| || || Sbjct 967192 ATACCCTCCTTGTCCTGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAACC 967133 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||||| ||||| || ||||| |||||||| Sbjct 967132 TCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217711729697