Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 178 1e-39 seq54 129 6e-25 seq165 123 2e-23 seq257 91.5 1e-13 >seq1 Length=1832336 Score = 178 bits (196), Expect = 1e-39 Identities = 530/805 (66%), Gaps = 31/805 (4%) Strand=Plus/Plus Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423 || || ||||| || ||||| || ||||||| | ||| || | | ||| || ||||| Sbjct 895683 ACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATATCCATGAAATCGAAG 895742 Query 120424 GGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACT-GTACGAGCAGTCGGTCCGCTAC 120482 ||||| ||| ||| ||| || | || | | | || ||||| |||||||| || Sbjct 895743 GGGTTCGTCGAGTTGTAGTGCCTCTCGTTACCAAGCGCGCAC-AGCAGACGGTCCGCGAC 895801 Query 120483 AAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGC 120542 ||||| ||||||| |||||| ||| |||||||||||| | | | || || | ||| Sbjct 895802 GAACTCGATGTACTGGCACATCAACTTCGCGTTCATGCCGATGAGAGAGACGGGGAGCGC 895861 Query 120543 CGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGA--ACATGGCGAGCATAGTG 120600 ||| | ||||||| ||| ||| | || ||||| || | ||||| | | Sbjct 895862 GTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATCTGGCGGAC-----G 895916 Query 120601 TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGT------AGTACAGGCACGCAAAGTCC 120654 | |||| || | || |||| | ||| || ||||| |||||||| Sbjct 895917 ACGTCGGG----GTGAGGACG--GCGCCTGAGGTGGGAGAAGAGGAGGCAGGCAAAGTCG 895970 Query 120655 GTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATG 120714 ||||||| ||||||||| || || ||||||||| || || || || ||||| | | Sbjct 895971 GTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGG 896030 Query 120715 CCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACG 120774 || | |||||| |||| || | ||| ||| ||| || ||||| | ||||| ||| Sbjct 896031 CCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACG 896090 Query 120775 ATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-CTGTCGATCCACTTCAT 120833 ||| |||||||| | |||||||| || | || ||||| |||| |||||| || Sbjct 896091 GCGGCGAAGGCGACGAGACGCTCGGCGAAGGACGAGTTCTTGTCTGT-GATCCAGCGCAG 896149 Query 120834 GGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATGTC 120893 |||||| |||||||| || | ||| || || ||||| |||| | || || Sbjct 896150 GGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGAGGTATTC 896209 Query 120894 GCGCTCGCCCTCCTCCGCAAT-CAGCTGATGGATGAGCAGATTGTACATTTCCGTGTGCA 120952 ||||| ||| || || || | |||||| || ||| | || | ||| | Sbjct 896210 GCGCTGCTTGGGGTCCTTGATGTAGGTG-TCGATGAGGAGGGAGTATGTCTCGGAGTGGA 896268 Query 120953 CGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGGCACCGCCC 121012 | ||| |||| | || ||| ||| | ||||||| | |||| | | Sbjct 896269 TGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGCCTGCAC--CTC 896326 Query 121013 GCTGCATGTA---CTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGAACG 121069 | || | | | ||||| ||||| || ||||||| ||||| ||| |||||||| | Sbjct 896327 GTTGGA-GAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGG 896385 Query 121070 CCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCAAAATCGTCAT 121129 | || ||||| ||| ||||| ||||||| ||| ||||||| | | | | |||| | Sbjct 896386 CAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCCAGTCGTGCT 896445 Query 121130 AGTCCTTGGACAGGTCGACCTCCTC 121154 ||||||||| ||||| | |||||| Sbjct 896446 GGTCCTTGGAGAGGTCCATCTCCTC 896470 >seq54 Length=1324731 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || || ||| | ||||||||||||||||| Sbjct 967510 GTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCA-TCCTCGAGCTGCTTGCC 967452 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||||||||||||||| ||||| || |||||| ||| Sbjct 967451 GGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTT 967392 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || ||| | | ||| | | ||| || || | |||| || |||||||||| ||| Sbjct 967391 GACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGT 967332 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 967331 CTTGACGAAGATCTGCAT 967314 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| || | || | | | |||||||||| Sbjct 967801 ATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCA-TCCTCGAGCT 967743 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | ||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct 967742 GCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCT 967683 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||| | ||| | | ||| | | ||| || |||| |||| || || |||| Sbjct 967682 TTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGTGATAGTCTTTCCGG 967623 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || ||||| |||||||| Sbjct 967622 TCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || |||||||| | ||| ||| | |||||||||||||||| Sbjct 968023 GGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCA-TCCTCGAGCTGCTTGC 967965 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||||||||| ||||||||||| |||||||| ||||| || Sbjct 967964 CAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTACCCT 967905 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| ||| | | ||||| | ||| || || | |||| || |||||||||| | Sbjct 967904 TGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAGG 967845 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 967844 TCTTGACGAAGATCTGCAT 967826 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| |||||||| ||| | || ||| |||||||||||||||||| Sbjct 967282 GTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACC-GTCCTCGAGCTGCTTGCC 967224 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| ||||| || || |||||||| ||||| || Sbjct 967223 GGCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGCCTTT 967164 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || ||| | | ||| | || ||| || |||| |||| ||| || || |||| || Sbjct 967163 GACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGT 967104 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 967103 CTTGACAAAGATCTGCAT 967086 >seq165 Length=362420 Score = 123 bits (136), Expect = 2e-23 Identities = 148/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || || |||||| | || |||| |||||| ||||| |||| Sbjct 206979 GTAGACTCCTTCTGGATGTTATAATCGGAGAGAGT--ACGACCGTCCTCAAGCTGTTTGC 206922 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||| || |||||||||||||| |||||||| |||||| || Sbjct 206921 CAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTGAATCTTTCCCT 206862 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | ||| | |||||| || ||| || || | ||||| ||| |||||||| || | Sbjct 206861 TAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTCTTGCCGGTGAGCG 206802 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 206801 TCTTAACGAAGATCTGCAT 206783 Score = 102 bits (112), Expect = 8e-17 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| ||||| || ||| | || | | | || || |||||||||| Sbjct 206698 GGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCA-TCTTCAAGCTGCTTGC 206640 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| ||||||||||||||||| ||||| || ||||| || Sbjct 206639 CGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCT 206580 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| | || | | ||| || || | ||||| || |||||||| |||| Sbjct 206579 TCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAG 206520 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 206519 TCTTGACAAAGATCTGCATGCCT 206497 Score = 102 bits (112), Expect = 8e-17 Identities = 147/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | || | | | || |||||||| ||||| Sbjct 207205 GTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCA-TCTTCGAGCTGTTTGCC 207147 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||| ||||| ||||||||||| |||||||| |||||| ||| Sbjct 207146 GGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTGGATCTTGCCCTT 207088 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | ||| | |||||| || ||| || || | ||| | ||| |||||||| ||||| Sbjct 207087 CACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTGCCGGTGAGAGT 207029 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || || || ||||||||| || Sbjct 207028 CTTGACAAAGATCTGCATGCCT 207007 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || |||||||| | |||| | | | ||||| ||||||||||| Sbjct 207432 GTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCA-TCCTCCAGCTGCTTGCC 207374 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||| || |||||||| || || |||||||| |||||| || Sbjct 207373 CGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGCCTTT 207314 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || ||| | |||| | | ||| || |||| ||| | || || || || || || Sbjct 207313 GACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCCGTAAGCGT 207254 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||| || |||||| || Sbjct 207253 CTTCACGAATATTTGCATGCCT 207232 >seq257 Length=1005854 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/102 (81%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || ||||| |||| || ||| | | | |||||||| Sbjct 387503 AAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCA-TCCTCGAG 387445 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGAT 133555 ||||||||| ||| | ||||| ||||||||||| |||||||| Sbjct 387444 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGAT 387403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418884445080